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L3_101_044G1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_044G1_scaffold_130_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

345..875
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS65_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23605.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_101_044G1_scaffold_130_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1224..3980
DNA (2757bp) protein (919aa)
UPF0182 protein CPF_0011 n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Y011_CLOP1
UPF0182 protein CPF_0011 {ECO:0000255|HAMAP-Rule:MF_01600}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
hypothetical protein
L3_101_044G1_scaffold_130_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4223..5617
DNA (1395bp) protein (465aa)
FAD-dependent oxidoreductase n=2 Tax=Clostridium perfringens RepID=Q0TV55_CLOP1
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EDT23602.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_044G1_scaffold_130_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5630..5863
DNA (234bp) protein (78aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26687.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_130_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6137..7492
DNA (1356bp) protein (452aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Serine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYS_CLOPE
L3_101_044G1_scaffold_130_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7669..8088
DNA (420bp) protein (140aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XPE8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23572.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_044G1_scaffold_130_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8705..8971
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRG4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18695.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_130_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9301..9483)
DNA (183bp) protein (61aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRG5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23624.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_044G1_scaffold_130_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9721..10602
DNA (882bp) protein (294aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CRG6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79724.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_101_044G1_scaffold_130_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10691..10855)
DNA (165bp) protein (55aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26666.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_130_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11064..14540
DNA (3477bp) protein (1159aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01452}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01452};; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01452};; ATP-dependent helicase/nuclease AddB {ECO:0000255|HAMAP-Rule:MF_01452}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS75_CLOPF
addB; ATP-dependent nuclease subunit B
L3_101_044G1_scaffold_130_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14530..18336
DNA (3807bp) protein (1269aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000255|HAMAP-Rule:MF_01451}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01451};; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01451};; ATP-dependent helicase/nuclease AddA {ECO:0000255|HAMAP-Rule:MF_01451}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS76_CLOPF
addA; ATP-dependent nuclease subunit A
L3_101_044G1_scaffold_130_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..19929)
DNA (1275bp) protein (425aa)
PolyA polymerase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TV45_CLOP1
poly(A) polymerase
PolyA polymerase family protein {ECO:0000313|EMBL:EDT15012.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_130_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20039..21031
DNA (993bp) protein (331aa)
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA6_CLOPF
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT26647.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
CMP-binding factor
L3_101_044G1_scaffold_130_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21063..22223)
DNA (1161bp) protein (387aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTG8_CLOPF
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDT15057.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_101_044G1_scaffold_130_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22415..23635
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
pepT; peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA4_CLOPF
L3_101_044G1_scaffold_130_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23741..24616)
DNA (876bp) protein (292aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWQ4_CLOPF
degV family protein
DegV family protein {ECO:0000313|EMBL:EDT26679.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_130_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25053..26192
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TV40_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71802.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_101_044G1_scaffold_130_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26307..27191)
DNA (885bp) protein (295aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00663}; EC=4.1.1.65 {ECO:0000255|HAMAP-Rule:MF_00663};; Contains:; Phosphatidylserine decarboxylase alpha chain {ECO:0000255|HAMAP-Rule:MF_00663}; Contains:; Phosphatidylserine decarboxylase beta chain {ECO:0000255|HAMAP-Rule:MF_00663}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=PSD_CLOP1
L3_101_044G1_scaffold_130_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27354..27923
DNA (570bp) protein (190aa)
TetR family transcriptional regulator n=3 Tax=Clostridium perfringens RepID=H7CRH7_CLOPF
TetR family transcriptional regulator {ECO:0000313|EMBL:EIA18708.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
TetR family transcriptional regulator
L3_101_044G1_scaffold_130_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28198..29463
DNA (1266bp) protein (422aa)
Hemolysin-related protein n=7 Tax=Clostridium perfringens RepID=H7CRH8_CLOPF
hlyA; hemolysin-like protein
Probable hemolysin-related protein {ECO:0000313|EMBL:BAB79736.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_101_044G1_scaffold_130_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29466..29897
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Cytidine/deoxycytidylate deaminase family protein n=4 Tax=Clostridium perfringens RepID=Q0TV36_CLOP1
cytidine/deoxycytidylate deaminase
L3_101_044G1_scaffold_130_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29975..30418
DNA (444bp) protein (148aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRI0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26646.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_130_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30540..30905
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CRI1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18712.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_101_044G1_scaffold_130_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31014..31676
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1R844_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26714.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_101_044G1_scaffold_130_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31791..33263)
DNA (1473bp) protein (491aa)
UPF0061 protein CJD_A0727 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2Y1_CLOPF
UPF0061 protein CJD_A0727 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_101_044G1_scaffold_130_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33594..34790
DNA (1197bp) protein (399aa)
Alpha toxin n=1 Tax=Clostridium perfringens RepID=Q5PXE6_CLOPF
Alpha toxin {ECO:0000313|EMBL:AAV76024.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
plc; phospholipase C
L3_101_044G1_scaffold_130_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34978..35904
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWP2_CLOPF
cobW; CobW/P47K family protein
CobW/P47K family protein {ECO:0000313|EMBL:EIA18716.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_044G1_scaffold_130_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35924..36508
DNA (585bp) protein (195aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CRI6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18717.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_101_044G1_scaffold_130_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36511..37404
DNA (894bp) protein (298aa)
Putative permease n=3 Tax=Clostridium perfringens RepID=Q0TV28_CLOP1
permease
Putative permease {ECO:0000313|EMBL:EDT26688.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying items 1-30 of 53 in total

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