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L3_101_044G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_044G1_scaffold_162_1
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

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comp(2..445)
DNA (444bp) protein (148aa)
Putative resolvase n=1 Tax=Clostridium phage vB_CpeS-CP51 RepID=M9Q1K0_9CAUD
Putative resolvase {ECO:0000313|EMBL:AGH27941.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
transposon Tn21 resolvase
L3_101_044G1_scaffold_162_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(938..1582)
DNA (645bp) protein (215aa)
DNA integration/recombination/inversion protein n=2 Tax=Clostridium perfringens RepID=B1BWC8_CLOPF
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:EDT13971.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage integrase family protein
L3_101_044G1_scaffold_162_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1869..2393)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWC7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14012.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_101_044G1_scaffold_162_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2587..2907)
DNA (321bp) protein (107aa)
Probable sigma factor n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWC6_CLOPF
Probable sigma factor {ECO:0000313|EMBL:EDT13980.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_162_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2930..3319)
DNA (390bp) protein (130aa)
Putative two-component sensor histidine kinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWC5_CLOPF
Putative two-component sensor histidine kinase {ECO:0000313|EMBL:EDT14004.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_162_6
unknown

Not on your lists

comp(3372..3734)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_101_044G1_scaffold_162_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3758..4090)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX77_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO87192.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_101_044G1_scaffold_162_8
unknown

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comp(4093..4296)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX78_CLOPF
L3_101_044G1_scaffold_162_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4497..4919)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPI8_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82536.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_101_044G1_scaffold_162_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4937..5206)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX81_CLOPF
Gp41 protein {ECO:0000313|EMBL:EDT14006.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_162_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5276..5641)
DNA (366bp) protein (122aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX82_CLOPF
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage-related single-strand DNA-binding protein
L3_101_044G1_scaffold_162_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5634..6389)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX85_CLOPF
Phage protein {ECO:0000313|EMBL:EDT13968.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage protein
L3_101_044G1_scaffold_162_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6352..7149)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX86_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13982.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
bacteriophage-like protein
L3_101_044G1_scaffold_162_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7181..7360)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BWB6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13963.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_162_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7489..7878
DNA (390bp) protein (130aa)
Transcriptional regulator n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWB5_CLOPF
Transcriptional regulator {ECO:0000313|EMBL:EDT13989.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
transcriptional regulator
L3_101_044G1_scaffold_162_16
unknown

Not on your lists

comp(7879..7977)
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX31_CLOPF
L3_101_044G1_scaffold_162_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8154..8396
DNA (243bp) protein (81aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T921_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EKQ56338.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_101_044G1_scaffold_162_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8451..9179)
DNA (729bp) protein (243aa)
Plasmid replication protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIW4_CLOPF
Plasmid replication protein {ECO:0000313|EMBL:EDT26095.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_162_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9631..10545
DNA (915bp) protein (305aa)
Putative plasmid partitioning protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSV7_CLOPF
Putative plasmid partitioning protein {ECO:0000313|EMBL:EDT15174.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_044G1_scaffold_162_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10530..10763
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens RepID=Q1PLJ8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81505.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_101_044G1_scaffold_162_21
unknown

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10970..11158
DNA (189bp) protein (63aa)

This feature has no annotations

L3_101_044G1_scaffold_162_22
unknown

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11190..11585
DNA (396bp) protein (132aa)

This feature has no annotations

L3_101_044G1_scaffold_162_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11619..11900)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIV9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26106.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_044G1_scaffold_162_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12031..12450
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIP0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26164.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_101_044G1_scaffold_162_25

Not on your lists

12665..12925
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium phage phiSM101 RepID=Q0SPH1_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:ABG87890.1}; TaxID=396359 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Clostridium phage phiSM101.;"
L3_101_044G1_scaffold_162_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12984..13163
DNA (180bp) protein (60aa)
Antidote-toxin recognition MazE family protein n=3 Tax=Clostridium difficile RepID=T2YHE9_CLODI
Antidote-toxin recognition MazE family protein {ECO:0000313|EMBL:EQE65908.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_101_044G1_scaffold_162_27

Not on your lists

13244..13657
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium phage phiSM101 RepID=Q0SPG9_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:ABG87889.1}; TaxID=396359 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Clostridium phage phiSM101.;"
hypothetical protein
L3_101_044G1_scaffold_162_28

Not on your lists

13673..13933
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium phage phiSM101 RepID=Q0SPG8_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:ABG87927.1}; TaxID=396359 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Clostridium phage phiSM101.;"
L3_101_044G1_scaffold_162_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14058..15074)
DNA (1017bp) protein (339aa)
N-acetylmuramoyl-L-alanine amidase domain-containing protein (EC:3.5.1.28)
Endolysin n=2 Tax=root RepID=Q8SBN4_9CAUD
Endolysin {ECO:0000313|EMBL:EDT22901.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_044G1_scaffold_162_30

Not on your lists

comp(15094..15879)
DNA (786bp) protein (262aa)
DNA adenine methylase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX40_CLOPF
Putative modification methylase dpniia {ECO:0000313|EMBL:ABG87921.1}; TaxID=396359 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Clostridium phage phiSM101.;"
DNA adenine methylase
Displaying items 1-30 of 63 in total

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