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L3_101_044G1_scaffold_440

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_044G1_scaffold_440_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1749)
DNA (1749bp) protein (583aa)
Inner membrane protein YfgF n=3 Tax=Citrobacter RepID=J0M497_9ENTR
Cyclic di-GMP phosphodiesterase YfgF {ECO:0000313|EMBL:ETX69826.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
c-di-GMP phosphodiesterase
L3_101_044G1_scaffold_440_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2118..2330)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=J1G812_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX69827.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_101_044G1_scaffold_440_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2668..3546
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R2K4_CITFR
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KEL78647.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
mechanosensitive channel MscS
L3_101_044G1_scaffold_440_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3746..4234)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=N2WDJ2_ECOLX
phage lysis protein
Uncharacterized protein {ECO:0000313|EMBL:EQP49810.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_101_044G1_scaffold_440_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4231..4857)
DNA (627bp) protein (209aa)
Predicted endolysin n=1 Tax=Escherichia coli O127:H6 (strain E2348/69 / EPEC) RepID=B7UGP7_ECO27
endolysin
Predicted endolysin {ECO:0000313|EMBL:CAS10282.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L3_101_044G1_scaffold_440_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4847..5155)
DNA (309bp) protein (103aa)
Holin n=5 Tax=root RepID=H2D0G3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:GAL43057.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
holin protein
L3_101_044G1_scaffold_440_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5142..5546)
DNA (405bp) protein (135aa)
Predicted membrane protein n=12 Tax=root RepID=B7UGP9_ECO27
integral membrane protein
Integral membrane protein, possible phage holin {ECO:0000313|EMBL:CBJ02119.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_101_044G1_scaffold_440_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6120..8792)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Escherichia coli 908675 RepID=V1B8Z6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EIG82451.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
tail fiber protein
L3_101_044G1_scaffold_440_9
Salmonella phage SPN1S, Caudovirales, Viruses

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8990..9250
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=root RepID=H2D0F7_9CAUD
Anti-repressor protein {ECO:0000313|EMBL:AGR48758.1}; TaxID=1327941 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Salmonella phage SPC32H.;"
hypothetical protein
L3_101_044G1_scaffold_440_10
unknown

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comp(9279..9680)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. CVM 19443 RepID=I9JWJ0_SALNE
L3_101_044G1_scaffold_440_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9729..10676)
DNA (948bp) protein (316aa)
Antirepressor-like protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. CVM 19443 RepID=J0DZG2_SALNE
Antirepressor protein {ECO:0000313|EMBL:EOU89952.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
ant; antirepressor protein Ant
L3_101_044G1_scaffold_440_12
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10747..10908)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Salmonella newport RepID=I9LSM2_SALNE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN45221.1}; TaxID=476213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella paratyphi C (strain RKS4594).;"
L3_101_044G1_scaffold_440_13
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11029..11382
DNA (354bp) protein (118aa)
Putative regulatory protein n=2 Tax=Salmonella newport RepID=I9JZH5_SALNE
Uncharacterized protein {ECO:0000313|EMBL:EHU00482.1}; TaxID=660596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii subsp. stewartii DC283.;"
regulatory protein
L3_101_044G1_scaffold_440_14
unknown

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11527..11826
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Salmonella newport RepID=J0DYA5_SALNE
L3_101_044G1_scaffold_440_15
unknown

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11991..12143
DNA (153bp) protein (51aa)

This feature has no annotations

L3_101_044G1_scaffold_440_16
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12128..12604
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUY9_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJM99591.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
L3_101_044G1_scaffold_440_17
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12663..12839
DNA (177bp) protein (59aa)
Putative transmembrane anchored protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R3I1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:CDL47620.1}; TaxID=1432558 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae ISC21.;"
hypothetical protein
L3_101_044G1_scaffold_440_18
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12880..15771)
DNA (2892bp) protein (964aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HG10_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KDM57021.1}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
hypothetical protein
L3_101_044G1_scaffold_440_19
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15771..18080)
DNA (2310bp) protein (770aa)
Lytic transglycosylase, catalytic n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FCE6_CITFR
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CDZ84625.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
putative lytic transglycosylase
Displaying 19 items

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