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L3_101_124G1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_124G1_scaffold_217_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

434..2785
DNA (2352bp) protein (784aa)
Peptidase, U32 family n=2 Tax=Clostridium perfringens RepID=Q0TP76_CLOP1
U32 family peptidase
Peptidase, U32 family {ECO:0000313|EMBL:EDT25825.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_101_124G1_scaffold_217_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2799..5159
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000255|HAMAP-Rule:MF_00092}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00092};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Endonuclease MutS2 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=MUTS2_CLOPE
mutS2; recombination and DNA strand exchange inhibitor protein
L3_101_124G1_scaffold_217_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5422..7605
DNA (2184bp) protein (728aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ81_CLOPE
Stage V sporulation protein D {ECO:0000313|EMBL:BAB81586.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
spoVD; stage V sporulation protein D
L3_101_124G1_scaffold_217_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7843..8286
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CXS3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15150.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_101_124G1_scaffold_217_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8300..9322
DNA (1023bp) protein (341aa)
FMN-dependent dehydrogenase n=2 Tax=Clostridium perfringens RepID=B1RJN1_CLOPF
FMN-dependent dehydrogenase {ECO:0000313|EMBL:EDT25832.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hydroxyacid oxidase 2
L3_101_124G1_scaffold_217_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9326..10042
DNA (717bp) protein (239aa)
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJN0_CLOPF
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:EDT25835.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glpQ; glycerophosphodiester phosphodiesterase
L3_101_124G1_scaffold_217_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10266..13064
DNA (2799bp) protein (933aa)
Calx-beta domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJM9_CLOPF
Calx-beta domain protein {ECO:0000313|EMBL:EDT25837.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
calx-beta domain-containing protein
L3_101_124G1_scaffold_217_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13222..17661
DNA (4440bp) protein (1480aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSK9_CLOPF
Fibronectin type III domain protein {ECO:0000313|EMBL:EDT71084.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_101_124G1_scaffold_217_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17798..18406
DNA (609bp) protein (203aa)
50S ribosomal protein L25 n=6 Tax=Clostridium perfringens RepID=RL25_CLOPE
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_101_124G1_scaffold_217_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18562..20289
DNA (1728bp) protein (576aa)
Phosphoglucomutase/phosphomannomutase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BT37_CLOPF
Phosphoglucomutase/phosphomannomutase family protein {ECO:0000313|EMBL:EDT15122.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
manB; phosphomannomutase
L3_101_124G1_scaffold_217_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20581..21678
DNA (1098bp) protein (366aa)
TPR domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL14_CLOPF
TPR domain protein {ECO:0000313|EMBL:EDS80290.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_101_124G1_scaffold_217_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21694..22410
DNA (717bp) protein (239aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EDT22543.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT22543.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Glycosyl transferase, WecB/TagA/CpsF family n=2 Tax=Clostridium perfringens RepID=B1RB58_CLOPF
L3_101_124G1_scaffold_217_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22410..23696
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXR4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16719.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_101_124G1_scaffold_217_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23725..24360
DNA (636bp) protein (212aa)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKG5_CLOPF
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EDT25561.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
methenyltetrahydrofolate cyclohydrolase
L3_101_124G1_scaffold_217_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24540..25337)
DNA (798bp) protein (266aa)
pdaA; delta-lactam-biosynthetic de-N-acetylase (EC:3.5.-.-)
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EDS80466.1}; EC=3.5.-.- {ECO:0000313|EMBL:EDS80466.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP90_CLOP1
L3_101_124G1_scaffold_217_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25496..26593
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=10 Tax=Clostridium perfringens RepID=H7CXR1_CLOPF
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_101_124G1_scaffold_217_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27141..28073
DNA (933bp) protein (311aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase H n=9 Tax=Clostridium perfringens RepID=RSMH_CLOP1
L3_101_124G1_scaffold_217_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28145..28573
DNA (429bp) protein (143aa)
Cell division protein FtsL n=6 Tax=Clostridium perfringens RepID=H7CXQ9_CLOPF
cell division protein FtsL
Putative cell division protein FtsL {ECO:0000313|EMBL:EDT15067.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_124G1_scaffold_217_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28761..30980
DNA (2220bp) protein (740aa)
Stage V sporulation protein D n=3 Tax=Clostridium perfringens RepID=H7CXQ8_CLOPF
Stage V sporulation protein D {ECO:0000313|EMBL:EDS80387.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
spoVD; stage V sporulation protein D
L3_101_124G1_scaffold_217_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31075..32529
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=2 Tax=Clostridium perfringens RepID=B1BIZ9_CLOPF
L3_101_124G1_scaffold_217_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32541..33902
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKF8_CLOPF
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L3_101_124G1_scaffold_217_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33952..34923
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Clostridium perfringens RepID=MRAY_CLOP1
L3_101_124G1_scaffold_217_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34951..36075
DNA (1125bp) protein (375aa)
Stage V sporulation protein E n=8 Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_124G1_scaffold_217_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36233..36979
DNA (747bp) protein (249aa)
Cell division protein FtsQ n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKF5_CLOPF
Cell division protein FtsQ {ECO:0000313|EMBL:EDT25556.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
cell division protein FtsQ
L3_101_124G1_scaffold_217_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36993..37709
DNA (717bp) protein (239aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_124G1_scaffold_217_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37722..38060
DNA (339bp) protein (113aa)
Small basic protein n=10 Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT23339.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_101_124G1_scaffold_217_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38073..38804
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RKF2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25557.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_101_124G1_scaffold_217_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38904..39563
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_101_124G1_scaffold_217_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39582..40031
DNA (450bp) protein (150aa)
Cell division protein SepF n=10 Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_101_124G1_scaffold_217_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40033..40794
DNA (762bp) protein (254aa)
S4 domain protein n=2 Tax=Clostridium perfringens RepID=B1RKZ5_CLOPF
S4 domain-containing protein
Probable cell-division protein {ECO:0000313|EMBL:BAB81558.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 41 in total

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