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L3_101_248G1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_101_248G1_scaffold_318_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..924
DNA (924bp) protein (308aa)
SIR2 family protein (EC:2.4.2.31)
Transcriptional regulator, Sir2 family n=2 Tax=Bifidobacterium dentium RepID=E0QA38_9BIFI
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:ETO97574.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1253..2560)
DNA (1308bp) protein (436aa)
tdcB; TdcB Threonine dehydratase (EC:4.3.1.19)
TdcB Threonine dehydratase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7L3_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28081.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_101_248G1_scaffold_318_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2687..4507)
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase 1 {ECO:0000313|EMBL:ETO97556.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ETO97556.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Oligo-1,6-glucosidase (EC:3.2.1.54)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA36_9BIFI
L3_101_248G1_scaffold_318_4
unknown

Not on your lists

comp(4686..4826)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_101_248G1_scaffold_318_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5045..5920)
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA30_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40622.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
raffinose transporter permease
L3_101_248G1_scaffold_318_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5941..6855)
DNA (915bp) protein (305aa)
Raffinose transport system permease protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L8_BIFDB
raffinose transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28086.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_101_248G1_scaffold_318_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6870..8162)
DNA (1293bp) protein (431aa)
Raffinose-binding protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7L9_BIFDB
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ETO97573.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
raffinose-binding protein
L3_101_248G1_scaffold_318_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8345..9547
DNA (1203bp) protein (401aa)
transcriptional repressor, ROK family (EC:2.7.1.4)
Transcriptional repressor, ROK family n=4 Tax=Bifidobacterium dentium RepID=D2Q7M0_BIFDB
ROK family protein {ECO:0000313|EMBL:ETO97560.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9996..12290)
DNA (2295bp) protein (765aa)
aga; alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=E0QA26_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:ETO97554.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12448..12903)
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
mesJ; tRNA-specific adenosine deaminase (EC:3.5.4.3)
MesJ tRNA-specific adenosine deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M2_BIFDB
L3_101_248G1_scaffold_318_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12985..15057
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9J3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28091.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
nhaP; NhaP Na+/H+ antiporter nhaP
L3_101_248G1_scaffold_318_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15345..16103
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M4_BIFDB
Serine hydrolase {ECO:0000313|EMBL:ETO97567.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
phospholipase/carboxylesterase
L3_101_248G1_scaffold_318_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16214..16795
DNA (582bp) protein (194aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Deoxycytidine triphosphate deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M5_BIFDB
L3_101_248G1_scaffold_318_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16949..19939)
DNA (2991bp) protein (997aa)
pacL2; PacL2 Calcium-transporting ATPase (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=2 Tax=Bifidobacterium dentium RepID=E0QA20_9BIFI
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:ETO97555.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20353..20475
DNA (123bp) protein (41aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9I7_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28095.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_101_248G1_scaffold_318_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20727..21710
DNA (984bp) protein (328aa)
spoU; SpoU rRNA methylase family protein (EC:2.1.1.34)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bifidobacterium dentium RepID=E0QA18_9BIFI
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ETO97549.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21787..23199)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QA17_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40609.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_101_248G1_scaffold_318_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23424..24551)
DNA (1128bp) protein (376aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM40608.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EFM40608.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.20)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QA16_9BIFI
L3_101_248G1_scaffold_318_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24870..25586
DNA (717bp) protein (239aa)
LytTr DNA-binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I2_9BIFI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ETO97577.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
virR; two-component response regulator VirR
L3_101_248G1_scaffold_318_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25583..26956
DNA (1374bp) protein (458aa)
Putative sensor histidine kinase VirS n=2 Tax=Bifidobacterium dentium RepID=E0QA13_9BIFI
GHKL domain protein {ECO:0000313|EMBL:ETO97568.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
virS; two-component sensor kinase virS
L3_101_248G1_scaffold_318_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27131..27538
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QA12_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40604.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_101_248G1_scaffold_318_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27465..28853)
DNA (1389bp) protein (463aa)
Chloride transporter, ClC family n=2 Tax=Bifidobacterium dentium RepID=E0QA11_9BIFI
Chloride transporter, ClC family {ECO:0000313|EMBL:ETO97553.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
chloride channel protein
L3_101_248G1_scaffold_318_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28942..30573)
DNA (1632bp) protein (544aa)
gatA; aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A (EC:3.5.1.4)
Amidase n=2 Tax=Bifidobacterium dentium RepID=E1N7P4_9BIFI
Amidase {ECO:0000313|EMBL:ETO97565.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30570..31373)
DNA (804bp) protein (268aa)
ABC transporter ATP-binding protein (EC:3.6.3.20)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QA09_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO97575.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31393..32214)
DNA (822bp) protein (274aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q7Z6_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB10798.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_101_248G1_scaffold_318_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32248..33228)
DNA (981bp) protein (327aa)
NMT1/THI5-like protein n=2 Tax=Bifidobacterium dentium RepID=E0QA07_9BIFI
NMT1/THI5-like protein {ECO:0000313|EMBL:EFM40599.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
twin-arginine translocation pathway signal
L3_101_248G1_scaffold_318_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33290..34453)
DNA (1164bp) protein (388aa)
acetamidase/Formamidase (EC:3.5.1.49)
Acetamidase/Formamidase family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QA06_9BIFI
Acetamidase/Formamidase family protein {ECO:0000313|EMBL:EFM40598.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_101_248G1_scaffold_318_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34674..35372
DNA (699bp) protein (233aa)
Transcriptional regulator, GntR family n=2 Tax=Bifidobacterium dentium RepID=E0QA05_9BIFI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFM40597.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
GntR family transcriptional regulator
L3_101_248G1_scaffold_318_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35462..36094
DNA (633bp) protein (211aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
LacA Galactoside O-acetyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q800_BIFDB
Maltose acetyltransferase {ECO:0000313|EMBL:ETO97584.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_101_248G1_scaffold_318_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36250..37446
DNA (1197bp) protein (399aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFM40595.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFM40595.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
aspC; aspartate aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=2 Tax=Bifidobacterium dentium RepID=E0QA03_9BIFI
Displaying items 1-30 of 38 in total

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