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L3_102_000G1_scaffold_3

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Displaying items 1-30 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000G1_scaffold_3_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..165
DNA (165bp) protein (55aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Roseburia intestinalis RepID=D4KL61_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL07613.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_102_000G1_scaffold_3_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

843..1430
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7GGS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99007.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_000G1_scaffold_3_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1553..2668
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZD33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17977.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
L3_102_000G1_scaffold_3_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2684..4426
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z149_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17978.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
L3_102_000G1_scaffold_3_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4416..5933
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZBY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17979.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Phage integrase family.
L3_102_000G1_scaffold_3_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5896..6285
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59362.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_102_000G1_scaffold_3_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6404..7003
DNA (600bp) protein (200aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJ20_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENY90429.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter
L3_102_000G1_scaffold_3_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7069..8937
DNA (1869bp) protein (623aa)
Glycogen operon protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3C4_9CLOT
Glycogen operon protein {ECO:0000313|EMBL:ENY90428.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
alpha amylase
L3_102_000G1_scaffold_3_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9029..9511)
DNA (483bp) protein (161aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSB2_9CLOT
L3_102_000G1_scaffold_3_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9672..12278
DNA (2607bp) protein (869aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3Z1_9CLOT
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENY90426.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
P-type HAD superfamily ATPase
L3_102_000G1_scaffold_3_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12628..13584
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VID2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90425.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
oligopeptide/dipeptide ABC transporter permease
L3_102_000G1_scaffold_3_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13597..14460
DNA (864bp) protein (288aa)
Peptide/nickel ABC transporter permease n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJ14_9CLOT
Peptide/nickel ABC transporter permease {ECO:0000313|EMBL:ENY90424.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
appC; Oligopeptide transport system permease protein AppC
L3_102_000G1_scaffold_3_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14498..16177
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90423.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
oligopeptide/dipeptide ABC transporter peptide-binding protein
L3_102_000G1_scaffold_3_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16212..17189
DNA (978bp) protein (326aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSA7_9CLOT
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ENY90422.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_102_000G1_scaffold_3_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17179..18171
DNA (993bp) protein (331aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3Y6_9CLOT
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ENY90421.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L3_102_000G1_scaffold_3_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18512..20008
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Glycerol kinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIC6_9CLOT
glycerol kinase
L3_102_000G1_scaffold_3_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20212..21648
DNA (1437bp) protein (479aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJ09_9CLOT
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ENY90419.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
FAD dependent oxidoreductase
L3_102_000G1_scaffold_3_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21662..22927
DNA (1266bp) protein (422aa)
Sarcosine oxidase subunit alpha n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3B4_9CLOT
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:ENY90418.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_102_000G1_scaffold_3_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22929..23297
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSA1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90417.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_000G1_scaffold_3_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23330..23959
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90416.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative integral membrane protein
L3_102_000G1_scaffold_3_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24316..25626
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90415.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sugar ABC transporter periplasmic protein
L3_102_000G1_scaffold_3_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25649..26557
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJ06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90414.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
permease component of ABC-type sugar transporter
L3_102_000G1_scaffold_3_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26569..27450
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90413.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter inner membrane protein
L3_102_000G1_scaffold_3_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27469..28197
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WS95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90412.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
glycerophosphoryl diester phosphodiesterase
L3_102_000G1_scaffold_3_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28505..29401
DNA (897bp) protein (299aa)
ureidoglycolate lyase (EC:4.3.2.3)
Ureidoglycolate lyase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3X6_9CLOT
Ureidoglycolate lyase {ECO:0000313|EMBL:ENY90411.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_102_000G1_scaffold_3_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29577..31424
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90410.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transporter
L3_102_000G1_scaffold_3_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31691..34261)
DNA (2571bp) protein (857aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90399.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_000G1_scaffold_3_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34361..34537)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X397_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90398.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_000G1_scaffold_3_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34694..35230)
DNA (537bp) protein (179aa)
Rubrerythrin n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WS78_9CLOT
Rubrerythrin {ECO:0000313|EMBL:ENY90397.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
rubrerythrin
L3_102_000G1_scaffold_3_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35392..35934)
DNA (543bp) protein (181aa)
Rubrerythrin n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3W2_9CLOT
Rubrerythrin {ECO:0000313|EMBL:ENY90396.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
rubrerythrin
Displaying items 1-30 of 328 in total

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