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L3_102_000G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000G1_scaffold_42_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

387..584
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=B6FQA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22571.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

559..1638
DNA (1080bp) protein (360aa)
N-acetyltransferase GCN5 (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22572.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_102_000G1_scaffold_42_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1854..2315
DNA (462bp) protein (154aa)
UPF0178 protein CLONEX_02321 n=2 Tax=Clostridium RepID=B6FQA2_9CLOT
UPF0178 protein BN618_00367 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2343..2876
DNA (534bp) protein (178aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FQA1_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA81797.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Acetyltransferases
L3_102_000G1_scaffold_42_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2945..3547)
DNA (603bp) protein (201aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22575.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_102_000G1_scaffold_42_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3676..5070
DNA (1395bp) protein (465aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridium RepID=B6FQ99_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEA81795.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_102_000G1_scaffold_42_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5331..5573
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22577.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_102_000G1_scaffold_42_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6325..7506
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81791.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_102_000G1_scaffold_42_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7496..7762
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22580.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_102_000G1_scaffold_42_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7886..9520
DNA (1635bp) protein (545aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Clostridium RepID=B6FQ93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22581.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell envelope-related function transcriptional attenuator common domain
L3_102_000G1_scaffold_42_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9752..13054
DNA (3303bp) protein (1101aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ92_9CLOT
L3_102_000G1_scaffold_42_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13067..15541
DNA (2475bp) protein (825aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ91_9CLOT
L3_102_000G1_scaffold_42_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15733..17175
DNA (1443bp) protein (481aa)
Divergent AAA domain protein n=2 Tax=Clostridium RepID=B6FQ90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22584.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
divergent AAA domain-containing protein
L3_102_000G1_scaffold_42_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17421..22544
DNA (5124bp) protein (1708aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ89_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81785.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_102_000G1_scaffold_42_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22590..23477
DNA (888bp) protein (296aa)
SpoIID/LytB domain protein n=2 Tax=Clostridium RepID=B6FQ88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22586.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
stage II sporulation protein D
L3_102_000G1_scaffold_42_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23520..24269
DNA (750bp) protein (250aa)
Peptidase, M23 family n=2 Tax=Clostridium RepID=B6FQ87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22587.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Membrane-bound metallopeptidase
L3_102_000G1_scaffold_42_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..25551
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FQ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23639.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L3_102_000G1_scaffold_42_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26617..31227
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23640.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31514..31906
DNA (393bp) protein (131aa)
GIY-YIG catalytic domain protein n=2 Tax=Clostridium RepID=B6FQ79_9CLOT
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EEA81817.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted endonuclease containing a URI domain
L3_102_000G1_scaffold_42_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31972..32712
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81816.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_102_000G1_scaffold_42_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32838..33788
DNA (951bp) protein (317aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ77_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81815.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L3_102_000G1_scaffold_42_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33772..34638
DNA (867bp) protein (289aa)
ABC-2 type transporter n=2 Tax=Clostridium RepID=B6FQ76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23644.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34651..36030
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23645.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L3_102_000G1_scaffold_42_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36043..36945
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23646.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36991..37644)
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=2 Tax=Clostridium RepID=B6FQ73_9CLOT
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEA81811.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
channel protein, hemolysin III family
L3_102_000G1_scaffold_42_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37937..39529
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PH13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23648.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Superfamily II DNA and RNA helicases
L3_102_000G1_scaffold_42_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39630..40232
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PSC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23649.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_102_000G1_scaffold_42_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40235..40801
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23650.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted membrane protein
L3_102_000G1_scaffold_42_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41175..44633
DNA (3459bp) protein (1153aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23651.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alkaline phosphatase-like protein
L3_102_000G1_scaffold_42_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44679..46730
DNA (2052bp) protein (684aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNY1_9CLOT
Displaying items 1-30 of 161 in total

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