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L3_102_000G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000G1_scaffold_162_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32..397)
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RK85_9CLOT
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:ENZ33753.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
capsular exopolysaccharide family
L3_102_000G1_scaffold_162_2
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(398..1147)
DNA (750bp) protein (250aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0AJ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96600.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Capsular polysaccharide biosynthesis protein
L3_102_000G1_scaffold_162_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1185..1898)
DNA (714bp) protein (238aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97077.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_102_000G1_scaffold_162_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1927..2415)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59530.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_102_000G1_scaffold_162_5
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2702..3235)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KP22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63877.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
LytT; response regulator of the LytR/AlgR family
L3_102_000G1_scaffold_162_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3409..4797)
DNA (1389bp) protein (463aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Glutamate synthase n=9 Tax=Clostridium RepID=G5I0N9_9CLOT
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ09597.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_102_000G1_scaffold_162_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4797..5687)
DNA (891bp) protein (297aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43424.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_102_000G1_scaffold_162_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5818..6729)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZAP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47221.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Galactose mutarotase and related enzymes
L3_102_000G1_scaffold_162_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6839..7351)
DNA (513bp) protein (171aa)
Dihydrofolate reductase n=3 Tax=Clostridium bolteae RepID=N9ZHB9_9CLOT
Dihydrofolate reductase {ECO:0000313|EMBL:ENZ39231.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
dihydrofolate reductase subunit
L3_102_000G1_scaffold_162_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7348..7848)
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3B3_9CLOT
L3_102_000G1_scaffold_162_11
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7981..9375)
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=2 Tax=Eubacterium RepID=C0ES99_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EEG37846.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
amino acid carrier protein
L3_102_000G1_scaffold_162_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9573..10496
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJF7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ33077.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transcriptional regulator
L3_102_000G1_scaffold_162_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10521..11027
DNA (507bp) protein (169aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Superoxide dismutase [Cu-Zn] n=8 Tax=Clostridium clostridioforme RepID=G5I0P7_9CLOT
hypothetical protein
L3_102_000G1_scaffold_162_14
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11151..14735)
DNA (3585bp) protein (1195aa)
Cell wall surface protein n=2 Tax=Streptococcus RepID=F5X5T4_STRPX
Cell wall surface protein {ECO:0000313|EMBL:KED04906.1}; Flags: Fragment;; TaxID=1051981 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. ruminatorum CECT 5772.;"
cell wall surface protein
L3_102_000G1_scaffold_162_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15025..16356
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PFV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24574.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_102_000G1_scaffold_162_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16524..16964
DNA (441bp) protein (147aa)
rubredoxin n=1 Tax=Succinispira mobilis RepID=UPI00036E2E08
Uncharacterized protein {ECO:0000313|EMBL:EEQ57083.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
6-pyruvoyl-tetrahydropterin synthase
L3_102_000G1_scaffold_162_17
unknown

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comp(16961..17143)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_102_000G1_scaffold_162_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17204..17656)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42516.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NUDIX hydrolase
L3_102_000G1_scaffold_162_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17766..18023)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59318.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_102_000G1_scaffold_162_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

18282..18809
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FL09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02752.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_102_000G1_scaffold_162_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18818..20590
DNA (1773bp) protein (591aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3B0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG54183.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter
L3_102_000G1_scaffold_162_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20643..22451
DNA (1809bp) protein (603aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VWD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24657.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ATP-binding cassette, subfamily B
L3_102_000G1_scaffold_162_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22453..24786)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42513.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
L3_102_000G1_scaffold_162_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24786..25259)
DNA (474bp) protein (158aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42512.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_102_000G1_scaffold_162_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25259..26050)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42511.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
molybdopterin dehydrogenase FAD-binding protein
L3_102_000G1_scaffold_162_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26163..27608)
DNA (1446bp) protein (482aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42510.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_102_000G1_scaffold_162_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27605..28966)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42509.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Bacterial cell division membrane protein
L3_102_000G1_scaffold_162_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28970..31207)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42508.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase U32
L3_102_000G1_scaffold_162_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31359..32462)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0Q2_9CLOT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Cell division protein ZapA.
L3_102_000G1_scaffold_162_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32546..33541)
DNA (996bp) protein (332aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0K8_9CLOT
Holliday junction DNA helicase, RuvB subunit
Displaying items 1-30 of 88 in total

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