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L3_102_000G1_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000G1_scaffold_251_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..469
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1C5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13415.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(568..1788)
DNA (1221bp) protein (407aa)
peptidase T (EC:3.4.11.4)
Peptidase T {ECO:0000256|SAAS:SAAS00064331, ECO:0000313|EMBL:CBL13416.1}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282, ECO:0000313|EMBL:CBL13416.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Peptidase T n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1C6_9FIRM
L3_102_000G1_scaffold_251_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2225..2863)
DNA (639bp) protein (213aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tRNA (guanine-N(7)-)-methyltransferase n=3 Tax=Roseburia intestinalis RepID=D4KTH8_9FIRM
L3_102_000G1_scaffold_251_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3113..4519
DNA (1407bp) protein (469aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL10181.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL10181.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTH9_9FIRM
L3_102_000G1_scaffold_251_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4747..5406
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1C9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13419.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5407..6282
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1D0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13420.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6307..6912)
DNA (606bp) protein (202aa)
Putative molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G969_9FIRM
Putative molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:EEV01618.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Molybdopterin-guanine dinucleotide biosynthesis protein A
L3_102_000G1_scaffold_251_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7019..8527
DNA (1509bp) protein (503aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Arginine/lysine/ornithine decarboxylases {ECO:0000313|EMBL:CBL13422.1}; EC=4.1.1.18 {ECO:0000313|EMBL:CBL13422.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Arginine/lysine/ornithine decarboxylases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1D2_9FIRM
L3_102_000G1_scaffold_251_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8558..9145
DNA (588bp) protein (196aa)
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW82_9FIRM
Guanylate kinase {ECO:0000313|EMBL:CDA56138.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_102_000G1_scaffold_251_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9176..9619
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B537_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56139.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_102_000G1_scaffold_251_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9721..10770
DNA (1050bp) protein (350aa)
DNA polymerase III, gamma/tau subunits (EC:2.7.7.7)
DNA polymerase III delta subunit n=2 Tax=Roseburia RepID=R6AYP5_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDA56140.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_102_000G1_scaffold_251_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10772..11683
DNA (912bp) protein (304aa)
Uncharacterized homolog of PSP1 n=3 Tax=Roseburia intestinalis RepID=D4KTI6_9FIRM
Uncharacterized homolog of PSP1
Uncharacterized homolog of PSP1 {ECO:0000313|EMBL:CBL13425.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11667..12413
DNA (747bp) protein (249aa)
Predicted O-methyltransferase n=4 Tax=Roseburia RepID=D4L1D6_9FIRM
Predicted O-methyltransferase {ECO:0000313|EMBL:CDA56142.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted O-methyltransferase
L3_102_000G1_scaffold_251_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12536..13297
DNA (762bp) protein (254aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Prolipoprotein diacylglyceryl transferase n=2 Tax=Roseburia RepID=D4KTI9_9FIRM
L3_102_000G1_scaffold_251_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13252..14340)
DNA (1089bp) protein (363aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G977_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEV01626.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
AraC-type DNA-binding domain-containing proteins
L3_102_000G1_scaffold_251_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14573..15622
DNA (1050bp) protein (350aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1D9_9FIRM
ABC-type Fe3+-hydroxamate transport system, periplasmic component
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:CBL13429.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15603..16598
DNA (996bp) protein (332aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTJ2_9FIRM
ABC-type Fe3+-siderophore transport system, permease component
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:CBL10194.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_102_000G1_scaffold_251_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16595..17605
DNA (1011bp) protein (337aa)
Ferrichrome transport system permease protein FhuG n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BBP4_9FIRM
Ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:CDA56511.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type Fe3+-siderophore transport system, permease component
L3_102_000G1_scaffold_251_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17613..18413
DNA (801bp) protein (267aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G981_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01630.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_102_000G1_scaffold_251_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18621..19640
DNA (1020bp) protein (340aa)
Bacterial Ig-like domain (Group 2) n=2 Tax=Roseburia intestinalis RepID=D4L1E3_9FIRM
Bacterial Ig-like domain (group 2).
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CBL13433.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19932..20108
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G984_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10199.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_102_000G1_scaffold_251_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20105..20620
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01634.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_102_000G1_scaffold_251_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20876..21556
DNA (681bp) protein (227aa)
ABC transporter substrate-binding protein aliphatic sulphonates n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BTG5_9FIRM
ABC transporter substrate-binding protein aliphatic sulphonates {ECO:0000313|EMBL:CDA56522.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_102_000G1_scaffold_251_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21605..22390
DNA (786bp) protein (262aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Roseburia RepID=D4L1E6_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDA56524.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_102_000G1_scaffold_251_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22586..23305
DNA (720bp) protein (240aa)
Urea carboxylase-associated protein 2 n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B060_9FIRM
Urea carboxylase-associated protein 2 {ECO:0000313|EMBL:CDA56525.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
urea carboxylase-associated protein 2
L3_102_000G1_scaffold_251_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23378..24031
DNA (654bp) protein (218aa)
Urea carboxylase-associated protein 1 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTK3_9FIRM
urea carboxylase-associated protein 1
Urea carboxylase-associated protein 1 {ECO:0000313|EMBL:CBL10205.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_102_000G1_scaffold_251_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24061..27642
DNA (3582bp) protein (1194aa)
Urea carboxylase {ECO:0000313|EMBL:EEV01641.1}; EC=6.3.4.6 {ECO:0000313|EMBL:EEV01641.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Urea carboxylase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G992_9FIRM
urea carboxylase
L3_102_000G1_scaffold_251_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27659..29365
DNA (1707bp) protein (569aa)
allophanate hydrolase (EC:6.3.5.7 6.3.5.6)
Allophanate hydrolase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXD1_9FIRM
Allophanate hydrolase {ECO:0000313|EMBL:CDA56528.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_102_000G1_scaffold_251_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29428..29790
DNA (363bp) protein (121aa)
Nitrogen regulatory protein P-II n=2 Tax=Roseburia intestinalis RepID=D4L1F1_9FIRM
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CBL13441.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_000G1_scaffold_251_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29806..30147
DNA (342bp) protein (114aa)
Nitrogen regulatory protein PII n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTK7_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CDA56531.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Nitrogen regulatory protein PII
Displaying items 1-30 of 82 in total

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