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L3_102_000G1_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000G1_scaffold_252_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..255)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C931_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56149.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(506..793)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56147.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(797..1627)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Kurthia sp. JC8E RepID=UPI0002887B9F
Uncharacterized protein {ECO:0000313|EMBL:KGF56146.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage regulatory protein, Rha family
L3_102_000G1_scaffold_252_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1654..1869)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56145.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein predicted by Glimmer/Critica
L3_102_000G1_scaffold_252_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2386..3417
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037EFC9E
Uncharacterized protein {ECO:0000313|EMBL:KGF56144.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_102_000G1_scaffold_252_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3447..4016
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56143.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_102_000G1_scaffold_252_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4431..5537
DNA (1107bp) protein (369aa)
Site-specific recombinase, phage integrase family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LK61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56142.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Phage integrase family.
L3_102_000G1_scaffold_252_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6228..6749)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWR9_9FIRM
hypothetical protein
L3_102_000G1_scaffold_252_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6792..7265)
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWS0_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
smpB; SsrA-binding protein
L3_102_000G1_scaffold_252_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7335..7829)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C900_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56139.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8007..8543
DNA (537bp) protein (179aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=G9YWS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35742.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_102_000G1_scaffold_252_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8562..9272
DNA (711bp) protein (237aa)
Transcriptional regulatory protein WalR n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARN3_9CLOT
Transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERI62058.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator
L3_102_000G1_scaffold_252_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9479..11266
DNA (1788bp) protein (596aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
two-component histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6X2_9FIRM
L3_102_000G1_scaffold_252_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11253..12617
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56135.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12630..13466
DNA (837bp) protein (279aa)
YycH protein n=2 Tax=Clostridiales RepID=G9YWS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56134.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14031
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YWS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35737.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_102_000G1_scaffold_252_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14138..14359
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35736.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_102_000G1_scaffold_252_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14935..15756
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56131.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16005..16754
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56130.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16736..17437
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=G9YWT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35734.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
OmpR family two-component response regulator
L3_102_000G1_scaffold_252_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17427..18602
DNA (1176bp) protein (392aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YWT7_9FIRM
L3_102_000G1_scaffold_252_22
unknown

Not on your lists

19096..19314
DNA (219bp) protein (73aa)

This feature has no annotations

L3_102_000G1_scaffold_252_23
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19221..20042)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1G4_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99181.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_102_000G1_scaffold_252_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20067..20330)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56681.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_102_000G1_scaffold_252_25
unknown

Not on your lists

comp(20513..20803)
DNA (291bp) protein (97aa)

This feature has no annotations

L3_102_000G1_scaffold_252_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20817..21278)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52365.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_102_000G1_scaffold_252_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21311..21526)
DNA (216bp) protein (72aa)
DNA-binding protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W7X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52363.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator
L3_102_000G1_scaffold_252_28
unknown

Not on your lists

21773..22132
DNA (360bp) protein (120aa)

This feature has no annotations

L3_102_000G1_scaffold_252_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22210..23301
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52357.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative endonuclease
L3_102_000G1_scaffold_252_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

25071..25970
DNA (900bp) protein (300aa)
Phage integrase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5E7_9FIRM
Phage integrase {ECO:0000313|EMBL:CCZ46009.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
phage integrase family protein
Displaying items 1-30 of 96 in total

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