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L3_102_000M1_scaffold_4059

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_4059_1
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..109
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IGQ2_9FIRM
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EOS33625.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
TRAG family protein
L3_102_000M1_scaffold_4059_2

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201..584
DNA (384bp) protein (128aa)
TnpV protein n=2 Tax=human gut metagenome RepID=K1TZW6_9ZZZZ
TnpV protein {ECO:0000313|EMBL:EKC78577.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_3

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599..781
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1V414_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78576.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_4

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794..1096
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UKF8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78575.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_5
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1177..2022)
DNA (846bp) protein (282aa)
DNA-binding helix-turn-helix protein n=3 Tax=Firmicutes RepID=G9YKL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47902.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_102_000M1_scaffold_4059_6

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2381..2674
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1RZ13_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC50553.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_7

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2658..2963
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1TL54_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC68329.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
UvrD; superfamily I DNA
L3_102_000M1_scaffold_4059_8

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3458..4477
DNA (1020bp) protein (340aa)
Uncharacterized protein (Fragment) n=2 Tax=human gut metagenome RepID=K1TVW3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71784.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_9

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4542..4919
DNA (378bp) protein (126aa)
DNA primase (Bacterial type) n=3 Tax=human gut metagenome RepID=K1U082_9ZZZZ
DNA primase (Bacterial type) {ECO:0000313|EMBL:EKC71785.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4968..6374
DNA (1407bp) protein (469aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E3GHV3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ09031.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_102_000M1_scaffold_4059_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6641..6808
DNA (168bp) protein (56aa)
Uncharacterized protein n=5 Tax=root RepID=E3GHV4_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ09030.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_102_000M1_scaffold_4059_12

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6880..8532
DNA (1653bp) protein (551aa)
TnpX site-specific recombinase n=3 Tax=human gut metagenome RepID=K1ULY5_9ZZZZ
TnpX site-specific recombinase {ECO:0000313|EMBL:EKC72546.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_4059_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8581..8805)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77202.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_102_000M1_scaffold_4059_14

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comp(8951..9562)
DNA (612bp) protein (204aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=human gut metagenome RepID=K1TDA6_9ZZZZ
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EKC67723.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_102_000M1_scaffold_4059_15

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9861..10478
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=3 Tax=human gut metagenome RepID=K1TS33_9ZZZZ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKC72548.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transcriptional regulator, TetR family
L3_102_000M1_scaffold_4059_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10621..12423
DNA (1803bp) protein (601aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8S053_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14193.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
multidrug ABC transporter ATPase and permease
L3_102_000M1_scaffold_4059_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12424..14166
DNA (1743bp) protein (581aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8S051_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC45386.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
multidrug ABC transporter ATPase and permease
L3_102_000M1_scaffold_4059_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14321..14431
DNA (111bp) protein (37aa)
Type IV secretion system protein VirD4 n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KYP6_9FIRM
TRAG family protein
TraG family protein {ECO:0000313|EMBL:EGB92682.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Displaying 18 items

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