ggKbase home page

L3_102_000M1_scaffold_2056

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2056_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97..870)
DNA (774bp) protein (258aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EFG17925.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EFG17925.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Chorismate mutase/prephenate dehydratase n=10 Tax=root RepID=A6L211_BACV8
chorismate mutase/prephenate dehydratase
L3_102_000M1_scaffold_2056_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(875..1942)
DNA (1068bp) protein (356aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase n=6 Tax=Bacteroides RepID=E5UYQ3_9BACE
phospho-2-dehydro-3-deoxyheptonate aldolase
Putative 3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EET16187.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_2056_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1962..3146)
DNA (1185bp) protein (395aa)
Aminotransferase n=2 Tax=Bacteroides RepID=E5UYQ4_9BACE
Aminotransferase class I and II family protein {ECO:0000313|EMBL:KDS25357.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
aminotransferase
L3_102_000M1_scaffold_2056_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3121..3963)
DNA (843bp) protein (281aa)
Prephenate dehydratase n=8 Tax=Bacteroides RepID=A6L214_BACV8
prephenate dehydratase
Uncharacterized protein {ECO:0000313|EMBL:EIY82153.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4221..4577)
DNA (357bp) protein (119aa)
HTH-type transcriptional activator HxlR n=7 Tax=root RepID=C6Z5N1_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY82152.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4767..5297
DNA (531bp) protein (177aa)
Putative protease I n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3A7_9BACE
Putative protease I {ECO:0000313|EMBL:KDS25359.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
protease I
L3_102_000M1_scaffold_2056_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5366..6541
DNA (1176bp) protein (392aa)
Aminotransferase n=4 Tax=Bacteroides RepID=E5UYQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19361.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
aminotransferase
L3_102_000M1_scaffold_2056_8
unknown

Not on your lists

6588..6749
DNA (162bp) protein (54aa)

This feature has no annotations

L3_102_000M1_scaffold_2056_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6891..7493)
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z5N4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82149.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
membrane protein
L3_102_000M1_scaffold_2056_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7553..8503)
DNA (951bp) protein (317aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L219_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82148.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8518..10722)
DNA (2205bp) protein (735aa)
O-GlcNAcase BT_4395 {ECO:0000313|EMBL:EET16195.2}; EC=3.2.1.52 {ECO:0000313|EMBL:EET16195.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycoside hydrolase family 84 n=2 Tax=Bacteroides RepID=E5UYR1_9BACE
glycoside hydrolase
L3_102_000M1_scaffold_2056_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10778..12673)
DNA (1896bp) protein (632aa)
ATP-dependent DNA helicase, RecQ family n=6 Tax=root RepID=C6Z5N7_9BACE
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EIY82146.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
ATP-dependent DNA helicase RecQ
L3_102_000M1_scaffold_2056_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12791..14512)
DNA (1722bp) protein (574aa)
Single-stranded-DNA-specific exonuclease RecJ n=5 Tax=root RepID=D4V849_BACVU
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EOS06122.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
single-stranded-DNA-specific exonuclease
L3_102_000M1_scaffold_2056_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14678..15889)
DNA (1212bp) protein (404aa)
Aminopeptidase C n=7 Tax=root RepID=A6L223_BACV8
aminopeptidase C
Aminopeptidase C {ECO:0000313|EMBL:EFV65744.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_102_000M1_scaffold_2056_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15918..17309)
DNA (1392bp) protein (464aa)
Xaa-Pro aminopeptidase n=6 Tax=Bacteroides RepID=A6L224_BACV8
Xaa-Pro aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EIY82143.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17639..18493
DNA (855bp) protein (285aa)
Phospholipase, patatin family n=5 Tax=Bacteroides RepID=D4V845_BACVU
phosphoesterase
Uncharacterized protein {ECO:0000313|EMBL:EOS06125.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_2056_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18633..19433)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z5P2_9BACE
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KDS55846.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_2056_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19480..19584
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UM71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27655.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_2056_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19626..21161)
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribonuclease Y n=16 Tax=root RepID=RNY_BACV8
phosphodiesterase
L3_102_000M1_scaffold_2056_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21262..21555)
DNA (294bp) protein (98aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L228_BACV8
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_2056_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21585..21878)
DNA (294bp) protein (98aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L229_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82138.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22051..22512)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16205.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_102_000M1_scaffold_2056_23
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22569..22880
DNA (312bp) protein (104aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=10 Tax=root RepID=A6L231_BACV8
6-pyruvoyl-tetrahydropterin synthase
L3_102_000M1_scaffold_2056_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22867..23412
DNA (546bp) protein (182aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQ47_BACVU
hypothetical protein
L3_102_000M1_scaffold_2056_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23878..24186)
DNA (309bp) protein (103aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L233_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET16208.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_2056_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24201..24827)
DNA (627bp) protein (209aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L234_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82133.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_2056_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24961..26361)
DNA (1401bp) protein (467aa)
Amino acid carrier protein n=2 Tax=Bacteroides vulgatus RepID=A6L235_BACV8
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:ABR39749.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_2056_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26367..27014)
DNA (648bp) protein (216aa)
Divergent AAA domain protein n=5 Tax=Bacteroides RepID=C6Z5Q2_9BACE
Divergent AAA domain protein {ECO:0000313|EMBL:EET16211.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_102_000M1_scaffold_2056_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27147..31106
DNA (3960bp) protein (1320aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQ53_BACVU
two-component system sensor histidine kinase/response regulator, hybrid
L3_102_000M1_scaffold_2056_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31256..31534
DNA (279bp) protein (93aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L238_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS06138.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 102 in total

View Taxonomy