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L3_102_000M1_scaffold_2337

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2337_1
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1927)
DNA (1926bp) protein (642aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Alistipes sp. CAG:268 RepID=R6VQZ2_9BACT
L3_102_000M1_scaffold_2337_2
unknown

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2077..2220
DNA (144bp) protein (48aa)

This feature has no annotations

L3_102_000M1_scaffold_2337_3
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2506..4914
DNA (2409bp) protein (803aa)
cell wall binding repeat 2-containing protein n=1 Tax=Bacteroides faecis RepID=UPI000262E56E
FMN-binding domain protein {ECO:0000313|EMBL:CDC87884.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
L3_102_000M1_scaffold_2337_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5006..6193)
DNA (1188bp) protein (396aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB93_9BACT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFR57798.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Na+/H+ dicarboxylate symporter
L3_102_000M1_scaffold_2337_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6274..7044
DNA (771bp) protein (257aa)
Fe-S oxidoreductase n=2 Tax=Alistipes RepID=I3YKQ7_ALIFI
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:CCZ76022.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_2337_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7306..8667)
DNA (1362bp) protein (454aa)
SNF family Na+-dependent transporter n=1 Tax=Alistipes sp. JC136 RepID=UPI0002892EAD
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Na+-dependent transporters of the SNF family
L3_102_000M1_scaffold_2337_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9000..9353)
DNA (354bp) protein (118aa)
diguanylate cyclase n=1 Tax=Alistipes onderdonkii RepID=UPI000368DC2F
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AFL77508.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_2337_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9488..10780)
DNA (1293bp) protein (431aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Tyrosine--tRNA ligase n=3 Tax=Alistipes RepID=I3YKI9_ALIFI
L3_102_000M1_scaffold_2337_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10804..13149)
DNA (2346bp) protein (782aa)
DNA polymerase III, subunit gamma/tau n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKI8_ALIFI
DNA polymerase III subunits gamma and tau
DNA polymerase III, subunit gamma/tau {ECO:0000313|EMBL:AFL77506.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_2337_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13410..16007
DNA (2598bp) protein (866aa)
molecular chaperone ClpB n=1 Tax=Alistipes onderdonkii RepID=UPI0003806F8C
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ATP-dependent chaperone ClpB
L3_102_000M1_scaffold_2337_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16127..16906)
DNA (780bp) protein (260aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
1,4-dihydroxy-6-naphthoate synthase n=1 Tax=Alistipes onderdonkii RepID=UPI00035C9FE1
periplasmic solute-binding protein
L3_102_000M1_scaffold_2337_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16903..17430)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02729.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Phosphorylase superfamily
L3_102_000M1_scaffold_2337_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17437..18750)
DNA (1314bp) protein (438aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBK63617.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CBK63617.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Xaa-Pro aminopeptidase n=1 Tax=Alistipes senegalensis RepID=UPI00031816D6
Displaying 13 items

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