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L3_102_000M1_scaffold_1048

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1048_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..2418
DNA (2418bp) protein (806aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9FSW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS56824.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_102_000M1_scaffold_1048_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2661..2822
DNA (162bp) protein (54aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6YZ79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79977.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_1048_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2812..3768
DNA (957bp) protein (319aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6YZ78_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV69368.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_102_000M1_scaffold_1048_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3765..4835
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WG86_9BACE
Radical SAM superfamily protein {ECO:0000313|EMBL:KDS56827.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
radical SAM protein
L3_102_000M1_scaffold_1048_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4856..5104
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L025_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39039.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1048_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5297..6478
DNA (1182bp) protein (394aa)
MFS transporter, DHA1 family, arabinose polymer transporter n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEN9_BACVU
MFS transporter, DHA1 family, arabinose polymer transporter {ECO:0000313|EMBL:EOS02487.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
MFS transporter
L3_102_000M1_scaffold_1048_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6439..6858)
DNA (420bp) protein (140aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L027_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79972.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_1048_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6997..7464
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEZ8_BACVU
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ribosome maturation factor RimP
L3_102_000M1_scaffold_1048_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7467..8723
DNA (1257bp) protein (419aa)
Transcription termination factor NusA n=14 Tax=Bacteroides RepID=C3Q3S1_9BACE
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_102_000M1_scaffold_1048_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8765..11776
DNA (3012bp) protein (1004aa)
Translation initiation factor IF-2 n=3 Tax=root RepID=IF2_BACV8
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1048_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11915..12418
DNA (504bp) protein (168aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L031_BACV8
hypothetical protein
Membrane protein required for colicin V production {ECO:0000313|EMBL:EOS02492.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_1048_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12426..13877
DNA (1452bp) protein (484aa)
ABC transporter permease n=15 Tax=Bacteroides RepID=A6L032_BACV8
cysteine desulfurase activator complex subunit SufB
Cysteine desulfurase {ECO:0000313|EMBL:AII61909.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_102_000M1_scaffold_1048_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13905..14657
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=7 Tax=Bacteroides RepID=A6L033_BACV8
ABC transporter ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIY79966.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_1048_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14687..16030
DNA (1344bp) protein (448aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L034_BACV8
ABC transporter permease
FeS assembly protein SufD {ECO:0000313|EMBL:KDS33150.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1048_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16037..17251
DNA (1215bp) protein (405aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Aminotransferase n=7 Tax=Bacteroides RepID=A6L035_BACV8
aminotransferase
L3_102_000M1_scaffold_1048_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17299..17802
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEP7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02497.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_102_000M1_scaffold_1048_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18164..20098)
DNA (1935bp) protein (645aa)
Alpha,alpha-trehalase {ECO:0000313|EMBL:EFG19602.1}; EC=3.2.1.28 {ECO:0000313|EMBL:EFG19602.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Alpha,alpha-trehalase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3F7_BACVU
glycoside hydrolase
L3_102_000M1_scaffold_1048_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20116..23292)
DNA (3177bp) protein (1059aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Beta galactosidase small chain n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3F8_BACVU
glycoside hydrolase
L3_102_000M1_scaffold_1048_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23306..23908)
DNA (603bp) protein (201aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q3T2_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56844.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_1048_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23905..24186)
DNA (282bp) protein (94aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6L042_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_1048_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24301..25818)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8WEH1_9BACE
starch-binding protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF19080.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1048_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25839..28967)
DNA (3129bp) protein (1043aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides vulgatus RepID=D4V3G2_BACVU
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR39058.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_102_000M1_scaffold_1048_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29191..30816)
DNA (1626bp) protein (542aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3G3_BACVU
TPR repeat family protein {ECO:0000313|EMBL:KDS33161.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_102_000M1_scaffold_1048_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30918..31523
DNA (606bp) protein (202aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribonuclease HII n=8 Tax=root RepID=RNH2_BACV8
L3_102_000M1_scaffold_1048_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31776..32951)
DNA (1176bp) protein (392aa)
L-fucose:H+ symporter permease n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFD7_BACVU
H+ symporter permease {ECO:0000313|EMBL:KDS33163.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L-fucose permease
L3_102_000M1_scaffold_1048_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33064..34839)
DNA (1776bp) protein (592aa)
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
L3_102_000M1_scaffold_1048_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34861..35841)
DNA (981bp) protein (327aa)
Transcriptional regulator, FucR n=4 Tax=Bacteroides RepID=A6L049_BACV8
transcriptional regulator, FucR
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EET13919.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_1048_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36288..37802
DNA (1515bp) protein (505aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L3_102_000M1_scaffold_1048_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37905..38486
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P405_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19614.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_102_000M1_scaffold_1048_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38553..39740
DNA (1188bp) protein (396aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L052_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79948.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying items 1-30 of 47 in total

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