ggKbase home page

L3_102_000M1_scaffold_1087

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1087_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

167..1078
DNA (912bp) protein (304aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A6KXC8_BACV8
nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:KDS54929.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_1087_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1183..2085)
DNA (903bp) protein (301aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6KXC7_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR38091.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1087_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2297..2977
DNA (681bp) protein (227aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6KXC6_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17326.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1087_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3191..4597
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H8R7_BACVU
Response regulator {ECO:0000313|EMBL:KDS54926.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_102_000M1_scaffold_1087_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4591..7458
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZG46_BACVU
Response regulator {ECO:0000313|EMBL:KDS54926.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_102_000M1_scaffold_1087_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7623..9227
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TXJ0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74476.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_102_000M1_scaffold_1087_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9349..9963
DNA (615bp) protein (205aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00037921};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=7 Tax=Bacteroides RepID=A6KXB6_BACV8
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_102_000M1_scaffold_1087_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9975..10730
DNA (756bp) protein (252aa)
Transcriptional regulator of sugar metabolism n=15 Tax=root RepID=A6KXB5_BACV8
alkaline phosphatase
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:CDF17330.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1087_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11074..11919
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit n=4 Tax=Bacteroides RepID=A6KXB4_BACV8
transketolase
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDF17331.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1087_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11921..12847
DNA (927bp) protein (309aa)
Transketolase, C-terminal subunit n=2 Tax=Bacteroides vulgatus RepID=A6KXB3_BACV8
transketolase
Transketolase, C-terminal subunit {ECO:0000313|EMBL:ABR38077.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1087_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12873..14369
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000313|EMBL:KDS28180.1}; EC=2.7.1.30 {ECO:0000313|EMBL:KDS28180.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glycerol kinase 2 n=2 Tax=Bacteroides vulgatus RepID=A6KXB2_BACV8
glycerol kinase
L3_102_000M1_scaffold_1087_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14403..15827
DNA (1425bp) protein (475aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXB1_BACV8
hypothetical protein
L-fucose isomerase, C-terminal domain protein {ECO:0000313|EMBL:KDS28179.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1087_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15840..16856
DNA (1017bp) protein (339aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z740_9BACE
integral membrane protein
Ureide permease family protein {ECO:0000313|EMBL:KDS54918.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_1087_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16894..17712
DNA (819bp) protein (273aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=3 Tax=root RepID=D4V7U1_BACVU
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KDS54917.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
sugar ABC transporter
L3_102_000M1_scaffold_1087_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17871..19235
DNA (1365bp) protein (455aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rule:MF_00127};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Histidine--tRNA ligase n=2 Tax=Bacteroides vulgatus RepID=SYH_BACV8
L3_102_000M1_scaffold_1087_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19702..20820)
DNA (1119bp) protein (373aa)
Putative GTP-binding protein, putative GTPase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXA5_BACV8
GTPase
Putative GTP-binding protein, putative GTPase {ECO:0000313|EMBL:ABR38069.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1087_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20884..22302)
DNA (1419bp) protein (473aa)
Thiamine biosynthesis protein ThiH n=7 Tax=Bacteroides RepID=A6KXA4_BACV8
thiH; thiamine biosynthesis protein ThiH
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EET17786.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_1087_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22315..23349)
DNA (1035bp) protein (345aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase n=7 Tax=root RepID=A6KXA3_BACV8
[FeFe] hydrogenase H-cluster radical SAM maturase HydE {ECO:0000313|EMBL:KDS28172.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1087_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23358..25109)
DNA (1752bp) protein (584aa)
Putative hydrogenase n=2 Tax=Bacteroides RepID=A6KXA2_BACV8
hydrogenase
Putative hydrogenase {ECO:0000313|EMBL:ABR38066.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1087_20
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25205..25477
DNA (273bp) protein (91aa)
10 kDa chaperonin n=16 Tax=Bacteroides RepID=CH10_BACV8
molecular chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_102_000M1_scaffold_1087_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25519..27156
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=21 Tax=root RepID=CH60_BACV8
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
groEL; molecular chaperone GroEL
L3_102_000M1_scaffold_1087_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27600..28982
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TWB4_BACVU
MATE efflux family protein {ECO:0000313|EMBL:EIY74016.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transmembrane cation efflux protein
L3_102_000M1_scaffold_1087_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29018..29602
DNA (585bp) protein (195aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroides RepID=D4V7T2_BACVU
regulatory protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KDS54898.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_1087_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29599..29718
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7T1_BACVU
Putative membrane protein {ECO:0000313|EMBL:KDS26267.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1087_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29793..30332
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX97_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38061.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1087_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30456..31871)
DNA (1416bp) protein (472aa)
Glycosyl hydrolase family 109 protein 1 n=3 Tax=root RepID=G1091_BACV8
oxidoreductase
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EOS00121.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_1087_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32566..33066)
DNA (501bp) protein (167aa)
Putative NTP pyrophosphohydrolase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KX95_BACV8
NTP pyrophosphohydrolase
NUDIX domain protein {ECO:0000313|EMBL:KDS26266.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1087_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33185..34681)
DNA (1497bp) protein (499aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Histidine ammonia-lyase n=4 Tax=Bacteroides RepID=A6KX94_BACV8
histidine ammonia-lyase
L3_102_000M1_scaffold_1087_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34716..35339)
DNA (624bp) protein (208aa)
Formiminotransferase-cyclodeaminase n=7 Tax=Bacteroides RepID=D4V5R4_BACVU
methenyltetrahydrofolate cyclohydrolase
Uncharacterized protein {ECO:0000313|EMBL:EIY74024.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_000M1_scaffold_1087_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35360..36307)
DNA (948bp) protein (316aa)
Imidazolonepropionase {ECO:0000255|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000255|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00372}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Imidazolonepropionase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=HUTI_BACV8
imidazolonepropionase
Displaying items 1-30 of 135 in total

View Taxonomy