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L3_102_000M1_scaffold_1507

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Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1507_1
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..421
DNA (420bp) protein (140aa)
Nucleotidyl transferase domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIJ9_9CLOT
Nucleotidyl transferase domain protein {ECO:0000313|EMBL:CDD09250.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
nucleotidyl transferase domain protein
L3_102_000M1_scaffold_1507_2
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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553..2205
DNA (1653bp) protein (551aa)
Beta-lactamase domain-containing protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYU8_9CLOT
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CDD09251.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
RNA-metabolising metallo-beta-lactamase
L3_102_000M1_scaffold_1507_3
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2458..3687
DNA (1230bp) protein (410aa)
Peptidase U32 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WTE0_9CLOT
Peptidase U32 {ECO:0000313|EMBL:CDD10224.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
peptidase U32
L3_102_000M1_scaffold_1507_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3684..4826
DNA (1143bp) protein (381aa)
Predicted UDP-glucuronosyltransferase YPFP B/subtilis ortholog n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGH9_9CLOT
Predicted UDP-glucuronosyltransferase YPFP B/subtilis ortholog {ECO:0000313|EMBL:CDD10223.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
putative glycosyl transferase precursor
L3_102_000M1_scaffold_1507_5
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4829..5116
DNA (288bp) protein (96aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XVB0_9CLOT
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:CDD10222.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
stress responsive protein
L3_102_000M1_scaffold_1507_6
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5280..6125
DNA (846bp) protein (282aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Clostridium sp. CAG:349 RepID=R6X1S2_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_102_000M1_scaffold_1507_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6167..6661
DNA (495bp) protein (165aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Clostridium sp. CAG:349 RepID=R6X1S2_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_102_000M1_scaffold_1507_8
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6791..7825
DNA (1035bp) protein (345aa)
ApbE family protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WLD4_9CLOT
ApbE family protein {ECO:0000313|EMBL:CDD10220.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
ApbE family protein
L3_102_000M1_scaffold_1507_9
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7822..8208
DNA (387bp) protein (129aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:349 RepID=R6WTD3_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD10219.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_102_000M1_scaffold_1507_10
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8195..8731
DNA (537bp) protein (179aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium sp. CAG:349 RepID=R6WGH5_9CLOT
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:CDD10218.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_102_000M1_scaffold_1507_11
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9344..10570)
DNA (1227bp) protein (409aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Clostridium sp. CAG:349 RepID=R6XQP5_9CLOT
L3_102_000M1_scaffold_1507_12
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10781..12106
DNA (1326bp) protein (442aa)
GTPase Der n=1 Tax=Clostridium sp. CAG:349 RepID=R6WX97_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
engA; ribosome-associated GTPase EngA
L3_102_000M1_scaffold_1507_13
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12133..13371
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FVR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY04276.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
transcriptional regulator
L3_102_000M1_scaffold_1507_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13980..15347
DNA (1368bp) protein (456aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Stage IV sporulation protein A n=1 Tax=Clostridium sp. CAG:349 RepID=R6X183_9CLOT
stage IV sporulation protein A
L3_102_000M1_scaffold_1507_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15543..16148
DNA (606bp) protein (202aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WG13_9CLOT
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
L3_102_000M1_scaffold_1507_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16215..16619
DNA (405bp) protein (135aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Phosphodiesterase family protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WKY0_9CLOT
phosphoesterase
L3_102_000M1_scaffold_1507_17
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18125..18409
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09221.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
yerC; TrpR homologue YerC
L3_102_000M1_scaffold_1507_18
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18439..19659
DNA (1221bp) protein (407aa)
Serine dehydratase alpha chain n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIH1_9CLOT
Serine dehydratase alpha chain {ECO:0000313|EMBL:CDD09220.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
serine dehydratase alpha chain
L3_102_000M1_scaffold_1507_19
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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19640..20173
DNA (534bp) protein (178aa)
acetyltransferase, GNAT family protein id=3239073 bin=GWF2_Firmicute_57_13 species=Epulopiscium sp. 'N.t. morphotype B' genus=Epulopiscium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Tenericutes_57_13_curated
L3_102_000M1_scaffold_1507_20
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20260..20514
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09218.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_102_000M1_scaffold_1507_21
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20507..21625
DNA (1119bp) protein (373aa)
Stage IV sporulation protein-like protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XSD0_9CLOT
Stage IV sporulation protein-like protein {ECO:0000313|EMBL:CDD09217.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_102_000M1_scaffold_1507_22
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21640..23112
DNA (1473bp) protein (491aa)
YqfF n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYR6_9CLOT
YqfF {ECO:0000313|EMBL:CDD09216.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
metal dependent phosphohydrolase
L3_102_000M1_scaffold_1507_23
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23112..23585
DNA (474bp) protein (158aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIG8_9CLOT
metalloprotease
L3_102_000M1_scaffold_1507_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23611..24504
DNA (894bp) protein (298aa)
GTPase Era n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQI8_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
GTP-binding protein Era
L3_102_000M1_scaffold_1507_25
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24683..25402
DNA (720bp) protein (240aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. CAG:349 RepID=R6WDN7_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
recO; DNA repair protein RecO
L3_102_000M1_scaffold_1507_26
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25528..28170
DNA (2643bp) protein (881aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XSC3_9CLOT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD09212.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_102_000M1_scaffold_1507_27
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28426..29328
DNA (903bp) protein (301aa)
Alpha/beta hydrolase fold protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DTF0_9FIRM
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDA91798.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
alpha/beta hydrolase fold protein
L3_102_000M1_scaffold_1507_28
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29335..30642
DNA (1308bp) protein (436aa)
Geranylgeranyl reductase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EQT8_9FIRM
Geranylgeranyl reductase {ECO:0000313|EMBL:CDA92317.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L3_102_000M1_scaffold_1507_29
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30905..32467
DNA (1563bp) protein (521aa)
Putative aminoacid transporter n=1 Tax=Clostridium sp. CAG:349 RepID=R6WIT6_9CLOT
Putative aminoacid transporter {ECO:0000313|EMBL:CDD09340.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_102_000M1_scaffold_1507_30
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32575..33120
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WZ32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09341.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Displaying items 1-30 of 182 in total

View Taxonomy