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L3_102_000M1_scaffold_1547

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1547_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..161
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZDC6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY72932.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transposase
L3_102_000M1_scaffold_1547_2
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1723..4074
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IAR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14229.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_102_000M1_scaffold_1547_3
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4138..5526
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IIV3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14230.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
polygalacturonase
L3_102_000M1_scaffold_1547_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5523..7430
DNA (1908bp) protein (636aa)
Rhamnogalacturonan lyase yesW {ECO:0000313|EMBL:KDS54675.1}; EC=4.2.2.- {ECO:0000313|EMBL:KDS54675.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Polysaccharide lyase family 11, candidate rhamnogalacturonan lyase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR6_BACV8
polysaccharide lyase 11, rhamnogalacturonan lyase
L3_102_000M1_scaffold_1547_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7443..8858
DNA (1416bp) protein (472aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=D4V7C0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03802.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_102_000M1_scaffold_1547_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8896..9210
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-rhamnose mutarotase n=7 Tax=Bacteroides RepID=RHAM_BACV8
hypothetical protein
L3_102_000M1_scaffold_1547_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9291..13577
DNA (4287bp) protein (1429aa)
Sensor protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UXJ1_9BACE
Sensor protein {ECO:0000313|EMBL:EFV66040.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_102_000M1_scaffold_1547_8
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13659..13877)
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3PWD6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB38998.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_102_000M1_scaffold_1547_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14032..14385)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=15 Tax=Bacteroides RepID=RL19_BACV8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_102_000M1_scaffold_1547_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14583..15362
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9TUA2_BACVU
5'-nucleotidase
Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase {ECO:0000313|EMBL:ABR37875.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1547_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15374..16216
DNA (843bp) protein (281aa)
5'-nucleotidase n=4 Tax=Bacteroides RepID=A6KWR0_BACV8
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:CDF17577.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1547_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16262..17743
DNA (1482bp) protein (494aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycoside hydrolase family 3, candidate beta-glycosidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWQ9_BACV8
glycoside hydrolase family protein
L3_102_000M1_scaffold_1547_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17706..19160
DNA (1455bp) protein (485aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Glycoside hydrolase family 3, candidate beta-glycosidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWQ9_BACV8
glycoside hydrolase family protein
L3_102_000M1_scaffold_1547_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19278..19445
DNA (168bp) protein (56aa)
Ferredoxin n=14 Tax=Bacteroides RepID=C3PWD1_9BACE
4Fe-4S ferredoxin
Ferredoxin {ECO:0000313|EMBL:EET15348.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_102_000M1_scaffold_1547_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19623..20816)
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=3 Tax=Bacteroides RepID=A6KWQ8_BACV8
aspartate aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:KDS54665.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_1547_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20941..22155)
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=7 Tax=Bacteroides RepID=RIBBA_BACV8
GTP cyclohydrolase II
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_000M1_scaffold_1547_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22158..24008)
DNA (1851bp) protein (617aa)
Permease, YjgP/YjgQ family n=4 Tax=Bacteroides RepID=C6Z386_9BACE
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EET15345.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_102_000M1_scaffold_1547_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24140..24526)
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z385_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66051.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_102_000M1_scaffold_1547_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25112..27916
DNA (2805bp) protein (935aa)
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KWQ4_BACV8
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS26399.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transcriptional regulator
L3_102_000M1_scaffold_1547_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28152..29378
DNA (1227bp) protein (409aa)
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase n=3 Tax=root RepID=A6KWQ3_BACV8
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:ABR37867.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1547_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29403..29948
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=4 Tax=Bacteroides vulgatus RepID=D4V8X3_BACVU
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:KDS26413.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1547_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30074..33151
DNA (3078bp) protein (1026aa)
TonB-dependent receptor plug domain protein n=3 Tax=Bacteroides vulgatus RepID=D4V8X2_BACVU
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37865.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_102_000M1_scaffold_1547_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33162..34988
DNA (1827bp) protein (609aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9HIM7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03779.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_102_000M1_scaffold_1547_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35140..37074
DNA (1935bp) protein (645aa)
Glycoside hydrolase family 97 n=2 Tax=Bacteroides vulgatus RepID=A6KWP9_BACV8
glycoside hydrolase
Glycoside hydrolase family 97 {ECO:0000313|EMBL:ABR37863.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1547_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37071..37661
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIC8_BACVU
glycoside hydrolase
Glycoside hydrolase family 92 {ECO:0000313|EMBL:ABR37862.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_1547_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37709..40273
DNA (2565bp) protein (855aa)
Glycoside hydrolase family 92 n=2 Tax=Bacteroides vulgatus RepID=A6KWP8_BACV8
glycoside hydrolase
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:KDS26433.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_1547_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40427..42793)
DNA (2367bp) protein (789aa)
Glycoside hydrolase family 3, candidate beta-glycosidase n=2 Tax=Bacteroides vulgatus RepID=A6KWP7_BACV8
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:KDS26393.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycoside hydrolase family protein
L3_102_000M1_scaffold_1547_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42917..44530
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZRB8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04118.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_102_000M1_scaffold_1547_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44620..47358
DNA (2739bp) protein (913aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U6Q3_BACVU
Heparinase II/III-like protein {ECO:0000313|EMBL:EFG17779.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_102_000M1_scaffold_1547_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47517..50330
DNA (2814bp) protein (938aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides RepID=D4V8W4_BACVU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFG17777.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transcriptional regulator
Displaying items 1-30 of 130 in total

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