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L3_102_000M1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_33_1
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(134..976)
DNA (843bp) protein (281aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EEE42337.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EEE42337.1};; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
dTDP-4-dehydrorhamnose reductase, RfbD (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFU7_METSM
L3_102_000M1_scaffold_33_2
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1073..2311
DNA (1239bp) protein (413aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYT5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29722.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L3_102_000M1_scaffold_33_3
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2301..3476)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29721.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L3_102_000M1_scaffold_33_4
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(3800..5008)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29720.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L3_102_000M1_scaffold_33_5
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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5302..6549
DNA (1248bp) protein (416aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PX66_9EURY
L3_102_000M1_scaffold_33_6
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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6554..7036
DNA (483bp) protein (161aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PUX4_9EURY
L3_102_000M1_scaffold_33_7
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7008..8018
DNA (1011bp) protein (337aa)
3-isopropylmalate dehydrogenase, LeuB (EC:1.1.1.85)
Uncharacterized protein n=2 Tax=Methanobrevibacter RepID=R7PYT0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29717.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L3_102_000M1_scaffold_33_8
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8027..10360
DNA (2334bp) protein (778aa)
glycosyl transferase n=1 Tax=Methanobrevibacter smithii RepID=UPI00035E8AA2
Uncharacterized protein {ECO:0000313|EMBL:CDF29716.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
glycosyl transferase family protein
L3_102_000M1_scaffold_33_9
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10407..10499
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29715.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L3_102_000M1_scaffold_33_10
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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10515..10931
DNA (417bp) protein (139aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
6,7-dimethyl-8-ribityllumazine synthase n=3 Tax=Methanobrevibacter smithii RepID=RISB_METS3
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L3_102_000M1_scaffold_33_11
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10940..11878
DNA (939bp) protein (313aa)
Putative methanogenesis marker protein 11 n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFT7_METSM
Putative methanogenesis marker protein 11 {ECO:0000313|EMBL:EEE42327.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
DNA-binding protein
L3_102_000M1_scaffold_33_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11896..13587)
DNA (1692bp) protein (564aa)
dolichyl-phosphate mannoosyltransferase n=1 Tax=Methanobrevibacter smithii RepID=UPI00036AE7D8
Putative phage tail component domain protein {ECO:0000313|EMBL:EEE42326.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
glycosyl transferase family protein
L3_102_000M1_scaffold_33_13
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13663..14178)
DNA (516bp) protein (172aa)
Nitroreductase family protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFT5_METSM
Nitroreductase family protein {ECO:0000313|EMBL:EEE42325.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
nitroreductase NADH oxidase
L3_102_000M1_scaffold_33_14
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14510..16657
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29710.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
transcriptional accessory protein S1 RNA binding family protein
L3_102_000M1_scaffold_33_15
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16786..17712)
DNA (927bp) protein (309aa)
glycosyl transferase n=1 Tax=Methanobrevibacter smithii RepID=UPI00037233C7
Uncharacterized protein {ECO:0000313|EMBL:CDF29709.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
glycosyltransferase
L3_102_000M1_scaffold_33_16
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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18245..19555
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003768C29
Uncharacterized protein {ECO:0000313|EMBL:CDF29708.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L3_102_000M1_scaffold_33_17
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

19670..20098
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29707.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
GtrA-like surface polysaccharide biosynthesis protein, GtrA
L3_102_000M1_scaffold_33_18
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

20249..21268
DNA (1020bp) protein (340aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
phosphoribosylaminoimidazole carboxylase (NCAIR mutase), PurE (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, catalytic subunit n=2 Tax=Methanobrevibacter RepID=B9AFS9_METSM
L3_102_000M1_scaffold_33_19
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

21278..22534
DNA (1257bp) protein (419aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWG8_9EURY
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {ECO:0000313|EMBL:CDF29705.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase, UbiD
L3_102_000M1_scaffold_33_20
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

22537..23799
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036B0B35
Uncharacterized protein {ECO:0000313|EMBL:EEE42317.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
hypothetical protein
L3_102_000M1_scaffold_33_21
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23789..24835)
DNA (1047bp) protein (349aa)
pyruvate formate-lyase activating enzyme, PflA (EC:1.97.1.4)
Radical SAM domain protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFS6_METSM
Radical SAM domain protein {ECO:0000313|EMBL:EEE42316.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L3_102_000M1_scaffold_33_22
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24780..25700)
DNA (921bp) protein (307aa)
thiamine monphosphate kinase, ThiL (EC:2.7.4.16)
Thiamine monphosphate kinase ThiL n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYA6_9EURY
Thiamine monphosphate kinase ThiL {ECO:0000313|EMBL:CDF29701.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L3_102_000M1_scaffold_33_23
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25807..27438)
DNA (1632bp) protein (544aa)
Putative adhesin-like protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWG3_9EURY
Putative adhesin-like protein {ECO:0000313|EMBL:CDF29700.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
putative adhesin-like protein
L3_102_000M1_scaffold_33_24
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27508..27999)
DNA (492bp) protein (164aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|HAMAP-Rule:MF_00785}; EC=4.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00785};; CbiXS {ECO:0000256|HAMAP-Rule:MF_00785}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=3 Tax=Methanobrevibacter RepID=B9AFS2_METSM
L3_102_000M1_scaffold_33_25
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28041..28967)
DNA (927bp) protein (309aa)
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:EFC92948.1}; EC=4.99.1.3 {ECO:0000313|EMBL:EFC92948.1};; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZNV1_METSM
L3_102_000M1_scaffold_33_26
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28939..29337)
DNA (399bp) protein (133aa)
Predicted nucleic-acid-binding protein containing a Zn-ribbon n=4 Tax=Methanobrevibacter RepID=A5UMQ6_METS3
nucleic-acid-binding protein containing a Zn-ribbon
Predicted nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:ABQ87484.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L3_102_000M1_scaffold_33_27
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29456..30661)
DNA (1206bp) protein (402aa)
ATPase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYA2_9EURY
ATPase {ECO:0000313|EMBL:CDF29696.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
ATPase
L3_102_000M1_scaffold_33_28
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

30928..31869
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AFR8_METSM
hypothetical protein
Conserved hypothetical membrane protein Msm_1277 {ECO:0000313|EMBL:ABQ87482.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L3_102_000M1_scaffold_33_29
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

31869..32735
DNA (867bp) protein (289aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=B9AFR7_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF29694.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L3_102_000M1_scaffold_33_30
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32732..33985)
DNA (1254bp) protein (418aa)
MgtE-like divalent cation transporter n=2 Tax=Methanobrevibacter RepID=A5UMQ2_METS3
mgtE-like divalent cation transporter
Putative divalent cation transporter {ECO:0000313|EMBL:CDF29693.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
Displaying items 1-30 of 116 in total

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