ggKbase home page

L3_102_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_50_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(79..189)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K5ZXT8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20604.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_102_000M1_scaffold_50_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

429..1523
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82366.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_50_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1537..2319
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XCC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28721.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_000M1_scaffold_50_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2470..3918
DNA (1449bp) protein (483aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=C7XCC9_9PORP
NADH-dependent dyhydrogenase
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU50479.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_102_000M1_scaffold_50_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3942..4946
DNA (1005bp) protein (335aa)
Sugar phosphate isomerase/epimerase n=3 Tax=Parabacteroides RepID=A6LDL3_PARD8
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ABR43777.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_102_000M1_scaffold_50_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5078..8317
DNA (3240bp) protein (1080aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82362.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_50_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8321..8581
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LDL1_PARD8
hypothetical protein
Acetyltransferase family protein {ECO:0000313|EMBL:KDS49898.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_102_000M1_scaffold_50_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8578..9228)
DNA (651bp) protein (217aa)
Pentapeptide repeat protein n=4 Tax=Parabacteroides RepID=C7XCD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49494.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_102_000M1_scaffold_50_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9376..10233
DNA (858bp) protein (286aa)
Transcriptional regulator, effector binding domain protein n=2 Tax=Parabacteroides RepID=E1YYX6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28727.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
AraC family transcriptional regulator
L3_102_000M1_scaffold_50_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10350..11219)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AN76_9PORP
Putative bacterial transcription activator effector binding domain protein {ECO:0000313|EMBL:CDB49492.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
general stress protein
L3_102_000M1_scaffold_50_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11330..12139)
DNA (810bp) protein (270aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=E1YYX4_9PORP
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS49970.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
transcriptional regulator
L3_102_000M1_scaffold_50_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12176..13267)
DNA (1092bp) protein (364aa)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EFK61192.1}; EC=1.8.4.- {ECO:0000313|EMBL:EFK61192.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Methionine-R-sulfoxide reductase n=2 Tax=Parabacteroides RepID=E1YYX3_9PORP
peptide methionine sulfoxide reductase
L3_102_000M1_scaffold_50_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13361..14359)
DNA (999bp) protein (333aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Parabacteroides RepID=E1YYX2_9PORP
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFK61191.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_102_000M1_scaffold_50_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14540..15574
DNA (1035bp) protein (345aa)
Dienelactone hydrolase domain family protein n=2 Tax=Parabacteroides RepID=E1YYX1_9PORP
Dienelactone hydrolase domain family protein {ECO:0000313|EMBL:EFK61190.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_50_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15611..16420
DNA (810bp) protein (270aa)
AraC family transcriptional regulator n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS17_9BACE
AraC family transcriptional regulator {ECO:0000313|EMBL:EFI08744.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
helix-turn-helix domain-containing protein
L3_102_000M1_scaffold_50_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16541..17053
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YYW9_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08745.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_102_000M1_scaffold_50_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17072..18217
DNA (1146bp) protein (382aa)
Carboxymuconolactone decarboxylase family protein n=2 Tax=Parabacteroides RepID=E1YYW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28735.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
carboxymuconolactone decarboxylase
L3_102_000M1_scaffold_50_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18229..19287
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YYW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28736.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_000M1_scaffold_50_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19340..19651)
DNA (312bp) protein (104aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EFK61185.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EFK61185.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Methylated-DNA--protein-cysteine methyltransferase n=3 Tax=Bacteroidales RepID=D7IS21_9BACE
methylated-DNA methyltransferase
L3_102_000M1_scaffold_50_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19641..20354)
DNA (714bp) protein (238aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XCE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS49905.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_102_000M1_scaffold_50_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20382..21044)
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Uracil-DNA glycosylase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS23_9BACE
uracil-DNA glycosylase
L3_102_000M1_scaffold_50_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21144..23027
DNA (1884bp) protein (628aa)
ABC transporter, ATP-binding protein n=4 Tax=Bacteroidales RepID=D0TGU4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28740.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ABC transporter ATP-binding protein
L3_102_000M1_scaffold_50_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23041..24216
DNA (1176bp) protein (392aa)
Transmembrane transporter n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS25_9BACE
Transmembrane transporter {ECO:0000313|EMBL:EFI08752.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transmembrane transport protein
L3_102_000M1_scaffold_50_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24343..24744
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=D0TGU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82344.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_50_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24946..25158)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IVS5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49481.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_102_000M1_scaffold_50_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25201..25584
DNA (384bp) protein (128aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LDJ9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50498.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_102_000M1_scaffold_50_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25659..26051
DNA (393bp) protein (131aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XCE9_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61178.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_102_000M1_scaffold_50_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26193..27092
DNA (900bp) protein (300aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=D0TGT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28746.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_000M1_scaffold_50_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27144..28343
DNA (1200bp) protein (400aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=9 Tax=Bacteroidales RepID=A6LDJ5_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EKN30422.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_102_000M1_scaffold_50_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28344..29588
DNA (1245bp) protein (415aa)
Membrane protein n=2 Tax=Bacteroidales RepID=D7IS34_9BACE
FtsX-like permease family protein {ECO:0000313|EMBL:KDS50023.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
transmembrane permease
Displaying items 1-30 of 108 in total

View Taxonomy