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L3_102_000M1_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_57_1
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

248..562
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55275.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_2
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(622..2748)
DNA (2127bp) protein (709aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55274.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3016..3645
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55273.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_102_000M1_scaffold_57_4
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3710..4372)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55272.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_5
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4599..6008)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55271.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_6
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6272..7180)
DNA (909bp) protein (303aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUQ5_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDE55270.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
polysaccharide deacetylase
L3_102_000M1_scaffold_57_7
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7240..8799)
DNA (1560bp) protein (520aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Methionine--tRNA ligase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUB0_9CLOT
methionyl-tRNA synthetase
L3_102_000M1_scaffold_57_8
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8817..9668)
DNA (852bp) protein (284aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVC6_9CLOT
L3_102_000M1_scaffold_57_9
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9682..10638)
DNA (957bp) protein (319aa)
Exopolyphosphatase-related proteins n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXE0_9CLOT
Exopolyphosphatase-related proteins {ECO:0000313|EMBL:CDE55267.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
exopolyphosphatase
L3_102_000M1_scaffold_57_10
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10686..11042)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUQ1_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ribosome-binding factor A
L3_102_000M1_scaffold_57_11
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11081..14185)
DNA (3105bp) protein (1035aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVC3_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
translation initiation factor 2
L3_102_000M1_scaffold_57_12
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14172..14453)
DNA (282bp) protein (94aa)
Putative nucleic-acid-binding protein implicated in transcription termination n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUR9_9CLOT
Putative nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:CDE55261.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
putative nucleic-acid-binding protein implicated in transcription termination
L3_102_000M1_scaffold_57_13
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14472..15599)
DNA (1128bp) protein (376aa)
NusA antitermination factor n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUP8_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
NusA antitermination factor
L3_102_000M1_scaffold_57_14
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15627..16082)
DNA (456bp) protein (152aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVB8_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_102_000M1_scaffold_57_15
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16274..16441
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55256.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_102_000M1_scaffold_57_16
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16498..17445)
DNA (948bp) protein (316aa)
Probable manganese-dependent inorganic pyrophosphatase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUN2_9CLOT
Probable manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:CDE55240.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_17
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17515..18384)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55238.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_18
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18458..20812
DNA (2355bp) protein (785aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Endonuclease MutS2 n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUP2_9CLOT
MutS2 family protein
L3_102_000M1_scaffold_57_19
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20831..21568)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55234.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
putative UDP-N-acetylglucosamine diphosphorylase
L3_102_000M1_scaffold_57_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21537..22787)
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXB5_9CLOT
UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000313|EMBL:CDE55232.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
UDP-N-acetylglucosamine pyrophosphorylase
L3_102_000M1_scaffold_57_21
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22975..24453
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
Stage IV sporulation protein A n=1 Tax=Clostridium sp. CAG:356 RepID=R6YMT7_9CLOT
stage IV sporulation protein A
L3_102_000M1_scaffold_57_22
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24480..24986)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54228.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_23
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24995..25195)
DNA (201bp) protein (67aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUA0_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDE54227.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
XRE family transcriptional regulator
L3_102_000M1_scaffold_57_24
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25216..25683)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IRS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54226.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_25
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25703..27184)
DNA (1482bp) protein (494aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IRN0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDE54225.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_102_000M1_scaffold_57_26
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27349..27612
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IRA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54224.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_102_000M1_scaffold_57_27
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27778..28449
DNA (672bp) protein (224aa)
Universal bacterial protein YeaZ n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISE5_9CLOT
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CDE54223.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
glycoprotease family protein
L3_102_000M1_scaffold_57_28
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28465..28899
DNA (435bp) protein (145aa)
Possible ribosomal-protein-alanine N-acetyltransferase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU78_9CLOT
Possible ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:CDE54222.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
acetyltransferase
L3_102_000M1_scaffold_57_29
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28937..29737)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IRM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54220.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_102_000M1_scaffold_57_30
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29757..30059)
DNA (303bp) protein (101aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISD8_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
trxA; thioredoxin 1
Displaying items 1-30 of 107 in total

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