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L3_102_000M1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_94_1
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KVE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69034.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
hypothetical protein
L3_102_000M1_scaffold_94_2
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(566..2098)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L6Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69036.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
FHA domain-containing protein
L3_102_000M1_scaffold_94_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2160..3461)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23804.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
serine/threonine protein kinase
L3_102_000M1_scaffold_94_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3471..4139)
DNA (669bp) protein (223aa)
Flp pilus assembly protein protease CpaA n=1 Tax=Clostridium sp. CAG:413 RepID=R6P3J1_9CLOT
Flp pilus assembly protein protease CpaA {ECO:0000313|EMBL:CDC13021.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_102_000M1_scaffold_94_5
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4142..4936)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LS98_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67159.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_102_000M1_scaffold_94_6

Not on your lists

comp(4940..5641)
DNA (702bp) protein (234aa)
Cell surface protein n=1 Tax=human gut metagenome RepID=K1RTK0_9ZZZZ
Cell surface protein {ECO:0000313|EMBL:EKC51902.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_102_000M1_scaffold_94_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5655..8738)
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C9V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23800.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_102_000M1_scaffold_94_8
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8753..9355)
DNA (603bp) protein (201aa)
TadE-like protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LS93_CLOCD
TadE-like protein
TadE-like protein {ECO:0000313|EMBL:AEV67154.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_102_000M1_scaffold_94_9
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9440..9682)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR33335.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
L3_102_000M1_scaffold_94_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9716..10588)
DNA (873bp) protein (291aa)
Bacterial type II secretion system protein F domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5L6_9FIRM
Bacterial type II secretion system protein F domain.
Bacterial type II secretion system protein F domain {ECO:0000313|EMBL:CBL14911.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_94_11
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10600..11457)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NXB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13014.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_102_000M1_scaffold_94_12
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11472..12710)
DNA (1239bp) protein (413aa)
Flp pilus assembly protein ATPase CpaF n=1 Tax=Roseburia sp. CAG:303 RepID=R7IUF6_9FIRM
Flp pilus assembly protein ATPase CpaF {ECO:0000313|EMBL:CDE54282.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Flp pilus assembly protein, ATPase CpaF
L3_102_000M1_scaffold_94_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12732..13799)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40890.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L3_102_000M1_scaffold_94_14
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14024..19099)
DNA (5076bp) protein (1692aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CEG28510.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein
L3_102_000M1_scaffold_94_15
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19120..19578)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AIH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA40932.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_102_000M1_scaffold_94_16
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19590..21278)
DNA (1689bp) protein (563aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR33341.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
protein kinase family protein
L3_102_000M1_scaffold_94_17
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21290..22060)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68790.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
PrpC
L3_102_000M1_scaffold_94_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22444..22782
DNA (339bp) protein (113aa)
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYW2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM98611.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
XRE family transcriptional regulator
L3_102_000M1_scaffold_94_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23380..23964
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z376_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52590.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_102_000M1_scaffold_94_20
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24221..24484)
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FV61_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
SSU ribosomal protein S18P
L3_102_000M1_scaffold_94_21
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24505..24954)
DNA (450bp) protein (150aa)
Single-stranded DNA-binding protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ83_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
single-strand binding protein
L3_102_000M1_scaffold_94_22
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24979..25269)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GGD7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
30S ribosomal protein S6
L3_102_000M1_scaffold_94_23
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25382..26182)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KQI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69040.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
hypothetical protein
L3_102_000M1_scaffold_94_24
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26176..26874)
DNA (699bp) protein (233aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L6Z5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY69041.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
ABC transporter ATP-binding protein
L3_102_000M1_scaffold_94_25
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26871..27233)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L7V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69042.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
GntR family transcriptional regulator
L3_102_000M1_scaffold_94_26
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27443..27613)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZLU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA29852.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L3_102_000M1_scaffold_94_27
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27613..29355)
DNA (1743bp) protein (581aa)
NlpC/P60 family protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FW98_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDB13306.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_102_000M1_scaffold_94_28
unknown

Not on your lists

comp(29312..29446)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_102_000M1_scaffold_94_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29446..30831)
DNA (1386bp) protein (462aa)
F5/8 type C domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAL3_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDM50114.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Cna protein B-type domain-containing protein
L3_102_000M1_scaffold_94_30
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31306..32016)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FV57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13304.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
colicin V production protein
Displaying items 1-30 of 90 in total

View Taxonomy