ggKbase home page

L3_102_000M1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_97_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(365..1219)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHP0_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76508.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1223..2068)
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHN9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75174.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2420..3649)
DNA (1230bp) protein (410aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UAD2_9BACT
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:CCZ75173.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
AP superfamily protein
L3_102_000M1_scaffold_97_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3731..5050)
DNA (1320bp) protein (440aa)
Acetyl-CoA hydrolase n=3 Tax=Alistipes RepID=I3YHN7_ALIFI
acetyl-CoA hydrolase
Acetyl-CoA hydrolase {ECO:0000313|EMBL:AFL76505.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5075..5710)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHN6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76504.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5718..8633)
DNA (2916bp) protein (972aa)
Translation initiation factor IF-2 n=1 Tax=Alistipes sp. HGB5 RepID=E4MAJ3_9BACT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
translation initiation factor IF-2
L3_102_000M1_scaffold_97_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8664..9896)
DNA (1233bp) protein (411aa)
NusA antitermination factor n=2 Tax=Alistipes RepID=I3YHN4_ALIFI
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_102_000M1_scaffold_97_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10130..10597)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=2 Tax=Alistipes RepID=I3YHN3_ALIFI
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10725..11519)
DNA (795bp) protein (265aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Alistipes sp. HGB5 RepID=E4MAJ0_9BACT
L3_102_000M1_scaffold_97_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11525..12916)
DNA (1392bp) protein (464aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
beta-hydroxyacyl-(ACP) dehydratase FabZ (EC:3.5.1.108 4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=Alistipes sp. HGB5 RepID=E4MAI9_9BACT
L3_102_000M1_scaffold_97_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13003..13806
DNA (804bp) protein (268aa)
TonB family protein n=3 Tax=Alistipes RepID=I3YHN0_ALIFI
TonB family protein
TonB family protein {ECO:0000313|EMBL:CCZ76107.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13918..14352
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHM9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76497.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14411..14944
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAI7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58074.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_102_000M1_scaffold_97_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14960..16456
DNA (1497bp) protein (499aa)
NhaP-type Na+(K+)/H+ antiporter n=3 Tax=Alistipes RepID=I3YHM7_ALIFI
NhaP-type Na+(K+)/H+ antiporter
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:CCZ76104.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17059..17523
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHM6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76103.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17730..19976)
DNA (2247bp) protein (749aa)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAI4_9BACT
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EFR58058.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
N-acetyl-beta-hexosaminidase
L3_102_000M1_scaffold_97_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19981..22296)
DNA (2316bp) protein (772aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAI3_9BACT
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFR58064.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
beta-glucosidase-like glycosyl hydrolase
L3_102_000M1_scaffold_97_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22293..24518)
DNA (2226bp) protein (742aa)
Putative alpha-1,2-mannosidase n=1 Tax=Alistipes sp. HGB5 RepID=E4MAI2_9BACT
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFR58077.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
alpha-1,2-mannosidase
L3_102_000M1_scaffold_97_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24640..25374)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHM2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76490.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25454..26614)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MAI0_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CCZ76097.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_102_000M1_scaffold_97_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26629..29298)
DNA (2670bp) protein (890aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHM0_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76488.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29319..30302)
DNA (984bp) protein (328aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHL9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76095.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30322..31938)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UK65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76094.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_102_000M1_scaffold_97_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31957..35292)
DNA (3336bp) protein (1112aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UCX6_9BACT
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ76093.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
SusC/RagA family TonB-linked outer membrane protein
L3_102_000M1_scaffold_97_25
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35501..36511)
DNA (1011bp) protein (337aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V5W8_9BACT
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CCZ76092.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Fe2+-dicitrate sensor membrane protein
L3_102_000M1_scaffold_97_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36634..37218
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=2 Tax=Alistipes RepID=I3YHL5_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFR58082.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_102_000M1_scaffold_97_27
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37369..38523
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHL4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76482.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_102_000M1_scaffold_97_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38600..39766)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHL3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77115.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39796..40887)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHL2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77114.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_102_000M1_scaffold_97_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40916..42505)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MAG9_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CCZ77113.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
Displaying items 1-30 of 141 in total

View Taxonomy