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L3_102_000M1_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_158_1
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..354)
DNA (354bp) protein (118aa)
Lactoylglutathione lyase and related lyases n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JEB4_9FIRM
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CCY52933.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Lactoylglutathione lyase and related lyases
L3_102_000M1_scaffold_158_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(987..1466)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07914.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_102_000M1_scaffold_158_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1524..2195)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07913.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_102_000M1_scaffold_158_4
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2164..4038)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MT53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM54164.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_102_000M1_scaffold_158_5
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4052..5029)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM54165.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
KaiC.
L3_102_000M1_scaffold_158_6

Not on your lists

5280..5621
DNA (342bp) protein (114aa)
Protein containing Helix-turn-helix type 3 domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RUF9_9ZZZZ
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EKC46969.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transcriptional regulator, HTH-type
L3_102_000M1_scaffold_158_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5799..6620)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22529.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_102_000M1_scaffold_158_8
unknown

Not on your lists

comp(6745..7143)
DNA (399bp) protein (133aa)

This feature has no annotations

L3_102_000M1_scaffold_158_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7292..9496)
DNA (2205bp) protein (735aa)
Resolvase, N-terminal domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGB1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EET60475.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
DNA recombinase, putative
L3_102_000M1_scaffold_158_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9496..11598)
DNA (2103bp) protein (701aa)
Resolvase, N-terminal domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGB0_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EET60474.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
resolvase domain protein
L3_102_000M1_scaffold_158_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11820..13292)
DNA (1473bp) protein (491aa)
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3359D
Uncharacterized protein {ECO:0000313|EMBL:EGG81714.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Muramidase (flagellum-specific)
L3_102_000M1_scaffold_158_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13358..14065)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4N5_9CLOT
LysM domain-containing protein
LysM domain-containing protein {ECO:0000313|EMBL:CDM67796.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_102_000M1_scaffold_158_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14120..14542)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AY70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81721.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
toxin secretion/phage lysis holin
L3_102_000M1_scaffold_158_14
Clostridium phage phiCP13O, Caudovirales, Viruses

Not on your lists

comp(14646..17009)
DNA (2364bp) protein (788aa)
Lysophospholipase L1-related esterase n=1 Tax=Clostridium phage phiCP13O RepID=F8UBB9_9CAUD
Lysophospholipase L1-related esterase {ECO:0000313|EMBL:AEI74441.1}; TaxID=1042122 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCP13O.;"
L3_102_000M1_scaffold_158_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17144..20542)
DNA (3399bp) protein (1133aa)
Hep/Hag repeat protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YLX7_9FIRM
Hep/Hag repeat protein {ECO:0000313|EMBL:EFB86895.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
L3_102_000M1_scaffold_158_16
unknown

Not on your lists

comp(20563..20934)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_102_000M1_scaffold_158_17
unknown

Not on your lists

comp(21034..21243)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_102_000M1_scaffold_158_18
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21243..23156)
DNA (1914bp) protein (638aa)
Phage minor structural protein region n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NLG4_9FIRM
Phage minor structural protein region {ECO:0000313|EMBL:CCZ04613.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical phage protein
L3_102_000M1_scaffold_158_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23172..23948)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000380965A
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO05277.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_102_000M1_scaffold_158_20
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23963..29872)
DNA (5910bp) protein (1970aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37577
Phage tail tape measure protein TP901 family {ECO:0000313|EMBL:CDE34853.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
phage tail tape measure protein, TP901 family, core region
L3_102_000M1_scaffold_158_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30027..30248
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FXF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09760.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_102_000M1_scaffold_158_22
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30245..30826
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium Aus0085 RepID=S5VUK9_ENTFC
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03369.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L3_102_000M1_scaffold_158_23
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30807..31067
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Oribacterium RepID=G9WP81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10164.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
L3_102_000M1_scaffold_158_24
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31093..31431
DNA (339bp) protein (113aa)
PF12668 family protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WGK1_9FIRM
PF12668 family protein {ECO:0000313|EMBL:CDD10248.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_102_000M1_scaffold_158_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31543..31707)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B433_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77110.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_102_000M1_scaffold_158_26
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31704..32084)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQ79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73230.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L3_102_000M1_scaffold_158_27
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(32152..32979)
DNA (828bp) protein (276aa)
SPFH domain / Band 7 family protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LTQ4_9CLOT
HflC protein {ECO:0000313|EMBL:CRH59320.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
conserved hypothetical protein
L3_102_000M1_scaffold_158_28
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(33042..33656)
DNA (615bp) protein (205aa)
Major tail protein, phi13 family n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7K4_DEHE1
phi13 family major tail protein
Major tail protein, phi13 family {ECO:0000313|EMBL:AAW39677.1}; TaxID=243164 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
L3_102_000M1_scaffold_158_29
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33688..34005)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI000288BDC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27366.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_102_000M1_scaffold_158_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34016..34393)
DNA (378bp) protein (126aa)
Putative phage protein, HK97 gp10 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPX5_CLOSY
Phage protein, HK97 gp10 family {ECO:0000313|EMBL:ERJ96487.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Bacteriophage protein of unknown function (DUF646).
Displaying items 1-30 of 91 in total

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