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L3_102_000M1_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_164_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..163
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BAT1_TREDN
radical SAM protein
DNA repair photolyase {ECO:0000313|EMBL:CBL22824.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_102_000M1_scaffold_164_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

851..2017
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96830.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2312..3175
DNA (864bp) protein (288aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUR2_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK96831.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3177..4364
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN12_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35145.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_102_000M1_scaffold_164_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4361..6241
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99591.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_102_000M1_scaffold_164_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6444..7124
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUR5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96834.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7288..8010
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MS21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99589.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_102_000M1_scaffold_164_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8307..9254
DNA (948bp) protein (316aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN15_9FIRM
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:CBL35148.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_102_000M1_scaffold_164_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9259..10446
DNA (1188bp) protein (396aa)
Sodium--glutamate symport carrier (GltS) n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RD91_9FIRM
Sodium--glutamate symport carrier (GltS) {ECO:0000313|EMBL:CDC45815.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
sodium--glutamate symport carrier (gltS)
L3_102_000M1_scaffold_164_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10479..10703
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RA77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45813.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_102_000M1_scaffold_164_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11392..12084
DNA (693bp) protein (231aa)
Zn-dependent proteases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUR9_9FIRM
Zn-dependent proteases
Zn-dependent proteases {ECO:0000313|EMBL:CBK96838.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12088..12834
DNA (747bp) protein (249aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUS0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK96839.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12831..13421
DNA (591bp) protein (197aa)
Segregation and condensation protein B n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS13_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
scpB; Segregation and condensation protein B
L3_102_000M1_scaffold_164_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13488..14294
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUS1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96840.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14316..14720
DNA (405bp) protein (135aa)
Sporulation protein YtfJ n=2 Tax=Eubacterium RepID=D4JUS2_9FIRM
sporulation protein YtfJ
Sporulation protein YtfJ {ECO:0000313|EMBL:CDC47869.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_102_000M1_scaffold_164_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14781..15953
DNA (1173bp) protein (391aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK96842.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBK96842.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUS3_9FIRM
L3_102_000M1_scaffold_164_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15992..16747
DNA (756bp) protein (252aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBK96843.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Pseudouridine synthase n=2 Tax=root RepID=D4JUS4_9FIRM
L3_102_000M1_scaffold_164_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16744..17076
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=2 Tax=Eubacterium siraeum RepID=D4JUS5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35156.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_102_000M1_scaffold_164_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17223..18587
DNA (1365bp) protein (455aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.41 6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:CBK96845.1}; EC=4.1.1.41 {ECO:0000313|EMBL:CBK96845.1};; EC=6.4.1.3 {ECO:0000313|EMBL:CBK96845.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUS6_9FIRM
L3_102_000M1_scaffold_164_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18612..18977
DNA (366bp) protein (122aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=3 Tax=root RepID=D4JUS7_9FIRM
Acetyl/propionyl-CoA carboxylase, alpha subunit
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:CBK96846.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19006..20403
DNA (1398bp) protein (466aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Conserved carboxylase domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRB3_9FIRM
Conserved carboxylase domain protein {ECO:0000313|EMBL:CDC47889.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_102_000M1_scaffold_164_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20469..20909
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS04_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96847.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20980..21135)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUS9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96848.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21107..21478)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JUT0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96849.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_25
unknown

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comp(21634..22038)
DNA (405bp) protein (135aa)

This feature has no annotations

L3_102_000M1_scaffold_164_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22479..23711)
DNA (1233bp) protein (411aa)
Transcriptional regulator, GntR family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRZ0_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDR99558.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Transcriptional regulators
L3_102_000M1_scaffold_164_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23941..25515
DNA (1575bp) protein (525aa)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUT2_9FIRM
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CBK96851.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Sugar (pentulose and hexulose) kinases
L3_102_000M1_scaffold_164_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25529..26221
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose 5-phosphate 4-epimerase {ECO:0000313|EMBL:CBL35173.1}; EC=5.1.3.4 {ECO:0000313|EMBL:CBL35173.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L-ribulose 5-phosphate 4-epimerase n=2 Tax=Eubacterium RepID=D4MN40_9FIRM
L3_102_000M1_scaffold_164_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26699..27382
DNA (684bp) protein (228aa)
Predicted permease n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUT8_9FIRM
Predicted permease.
Predicted permease {ECO:0000313|EMBL:CBK96857.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_164_30
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27407..27682
DNA (276bp) protein (92aa)
Predicted permease n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUT8_9FIRM
Predicted permease.
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC47902.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Displaying items 1-30 of 91 in total

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