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L3_102_000M1_scaffold_350

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_350_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..301
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YXQ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61748.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_350_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(395..976)
DNA (582bp) protein (194aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LFB0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44374.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_102_000M1_scaffold_350_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(993..2516)
DNA (1524bp) protein (508aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000255|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000255|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000255|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000255|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000255|HAMAP-Rule:MF_01038};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=GPMI_PARD8
L3_102_000M1_scaffold_350_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2623..3321
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82972.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
zinc protease
L3_102_000M1_scaffold_350_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3372..6086)
DNA (2715bp) protein (905aa)
TonB-dependent receptor n=2 Tax=Parabacteroides RepID=E1YXR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24273.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
vitamin B12 receptor
L3_102_000M1_scaffold_350_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6187..13605)
DNA (7419bp) protein (2473aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFV0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82974.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_350_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13656..14246)
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Bacteroidales RepID=RUVA_PARD8
ruvA; Holliday junction DNA helicase RuvA
L3_102_000M1_scaffold_350_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14289..15164)
DNA (876bp) protein (292aa)
Gluconolactonase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IUL9_9BACE
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:EFI07597.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_102_000M1_scaffold_350_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15176..16630)
DNA (1455bp) protein (485aa)
TrkH family potassium uptake protein n=2 Tax=Bacteroidales RepID=K6AS16_9PORP
Cation transport family protein {ECO:0000313|EMBL:KDS73811.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
potassium uptake protein TrkH
L3_102_000M1_scaffold_350_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16640..17977)
DNA (1338bp) protein (446aa)
Trk system K+ uptake protein TrkA n=9 Tax=Bacteroidales RepID=A6LFB8_PARD8
trkA; potassium transporter peripheral membrane protein
TrkA N-terminal domain protein {ECO:0000313|EMBL:EEU50041.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_102_000M1_scaffold_350_11
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17998..19896)
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFV5_9BACE
L3_102_000M1_scaffold_350_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20290..20397
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AKM2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24266.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_102_000M1_scaffold_350_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20515..20880)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LFC0_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07593.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_102_000M1_scaffold_350_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20969..22699)
DNA (1731bp) protein (577aa)
TPR-repeat-containing protein n=3 Tax=Bacteroidales RepID=A6LFC1_PARD8
hypothetical protein
TPR-repeat-containing protein {ECO:0000313|EMBL:EFI07592.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_102_000M1_scaffold_350_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22926..23711)
DNA (786bp) protein (262aa)
Inositol-1-monophosphatase n=3 Tax=Bacteroidales RepID=A6LFC2_PARD8
inositol-1-monophosphatase
Inositol-1-monophosphatase {ECO:0000313|EMBL:EFI07591.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_102_000M1_scaffold_350_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23889..24563
DNA (675bp) protein (225aa)
TonB-dependent receptor plug domain-containing protein n=2 Tax=Bacteroidales RepID=D7IUL2_9BACE
TonB-dependent receptor plug domain-containing protein {ECO:0000313|EMBL:EFI07590.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
outer membrane protein
L3_102_000M1_scaffold_350_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24593..29203
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82984.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_350_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29200..31653
DNA (2454bp) protein (818aa)
Outer membrane protein, OMP85 family n=3 Tax=Bacteroidales RepID=E1YXS2_9PORP
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:EFK61764.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_350_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31783..33054
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82986.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_000M1_scaffold_350_20
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33160..34056)
DNA (897bp) protein (299aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Arginase n=4 Tax=Bacteroidales RepID=A6LFC7_PARD8
arginase
L3_102_000M1_scaffold_350_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34060..35268)
DNA (1209bp) protein (403aa)
Ornithine aminotransferase n=2 Tax=Parabacteroides RepID=E1YXS5_9PORP
Ornithine-oxo-acid transaminase {ECO:0000313|EMBL:EKN24257.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acetylornithine aminotransferase
L3_102_000M1_scaffold_350_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35458..37587)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDU9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50052.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_102_000M1_scaffold_350_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37589..41755)
DNA (4167bp) protein (1389aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61769.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
putative hemagglutinin-related protein
L3_102_000M1_scaffold_350_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41793..42605)
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61770.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_350_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42917..45067)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXT0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61772.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_102_000M1_scaffold_350_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45135..45608)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61773.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_350_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45905..47602
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXT2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61774.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_000M1_scaffold_350_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47709..48872)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24250.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_000M1_scaffold_350_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48879..49871)
DNA (993bp) protein (331aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JG38_9PORP
L3_102_000M1_scaffold_350_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49874..50953)
DNA (1080bp) protein (360aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Pseudouridine synthase n=7 Tax=Bacteroidales RepID=A6LFD1_PARD8
ribosomal large subunit pseudouridine synthase D
Displaying items 1-30 of 90 in total

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