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L3_102_000M1_scaffold_412

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_412_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..177)
DNA (177bp) protein (59aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB9_9FIRM
Beta-galactosidase, large subunit {ECO:0000313|EMBL:ACR75775.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_412_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(186..410)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX69370.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
alpha-L-fucosidase
L3_102_000M1_scaffold_412_3
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(412..1773)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZJR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39045.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_102_000M1_scaffold_412_4
unknown

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comp(2869..3240)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_102_000M1_scaffold_412_5
unknown

Not on your lists

comp(3477..3581)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_102_000M1_scaffold_412_6
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3790..3936)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z6N4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73626.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_102_000M1_scaffold_412_7
unknown

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comp(3952..4749)
DNA (798bp) protein (266aa)

This feature has no annotations

L3_102_000M1_scaffold_412_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4736..5818)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KSU7_CLOB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD29282.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
L3_102_000M1_scaffold_412_9
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5842..6984)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK41_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG60355.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_102_000M1_scaffold_412_10
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6981..7790)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Sporolactobacillus vineae RepID=UPI00028876F0
Uncharacterized protein {ECO:0000313|EMBL:AKG37858.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
L3_102_000M1_scaffold_412_11
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7833..9530)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NQJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF94502.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
KAP family P-loop domain.
L3_102_000M1_scaffold_412_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9506..9748)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecium E4453 RepID=G9SQA6_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ENZ43241.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
KAP family P-loop domain.
L3_102_000M1_scaffold_412_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9777..10439)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B40787
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23273.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_102_000M1_scaffold_412_14
unknown

Not on your lists

comp(10521..10688)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_102_000M1_scaffold_412_15
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11162..13285)
DNA (2124bp) protein (708aa)
Uncharacterized protein n=2 Tax=root RepID=R5ZR52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41993.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
mannose-1-phosphate guanylyltransferase
L3_102_000M1_scaffold_412_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13344..13685)
DNA (342bp) protein (114aa)
NAD-dependent epimerase/dehydratase (EC:4.2.1.46)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1134833 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium P1986.;"
GDP-L-fucose synthase n=16 Tax=Firmicutes RepID=C9BQ43_ENTFC
L3_102_000M1_scaffold_412_17
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13722..14144)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6ALG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41992.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
NusG antitermination factor
L3_102_000M1_scaffold_412_18
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14732..15472)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6A5Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41991.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_102_000M1_scaffold_412_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15503..16678)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZT59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41990.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_102_000M1_scaffold_412_20
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16708..18123)
DNA (1416bp) protein (472aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZW4_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDA41989.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
coproporphyrinogen III oxidase
L3_102_000M1_scaffold_412_21
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18286..18909)
DNA (624bp) protein (208aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z6P0_EUBE2
hydroxyacylglutathione hydrolase
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:ACR73632.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_102_000M1_scaffold_412_22
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18926..21226)
DNA (2301bp) protein (767aa)
GTP pyrophosphokinase n=1 Tax=Eubacterium eligens CAG:72 RepID=R6ALF5_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CDA41987.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
GTP pyrophosphokinase
L3_102_000M1_scaffold_412_23
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21283..22143)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z6P2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73634.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_102_000M1_scaffold_412_24
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22332..24701)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZT53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41985.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_102_000M1_scaffold_412_25
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24876..25397
DNA (522bp) protein (174aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Eubacterium RepID=C4Z6P6_EUBE2
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_102_000M1_scaffold_412_26
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25419..25862
DNA (444bp) protein (148aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
DUTP pyrophosphatase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZR41_9FIRM
dUTP pyrophosphatase
L3_102_000M1_scaffold_412_27
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26334..27386)
DNA (1053bp) protein (351aa)
Trigger factor n=1 Tax=Eubacterium eligens CAG:72 RepID=R6ALE7_9FIRM
Trigger factor {ECO:0000313|EMBL:CDA41982.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
trigger factor
L3_102_000M1_scaffold_412_28
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27569..27925)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Eubacterium RepID=C4Z6P9_EUBE2
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_102_000M1_scaffold_412_29
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27982..28179)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZT42_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
rpmI; 50S ribosomal protein L35
L3_102_000M1_scaffold_412_30
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28219..28713)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZV1_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
translation initiation factor IF-3
Displaying items 1-30 of 153 in total

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