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L3_102_000M1_scaffold_533

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Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_533_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162..512)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aspartate 1-decarboxylase n=14 Tax=Bacteroides RepID=PAND_BACV8
aspartate decarboxylase
L3_102_000M1_scaffold_533_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(534..1370)
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pantothenate synthetase n=12 Tax=Bacteroides RepID=PANC_BACV8
pantoate--beta-alanine ligase
L3_102_000M1_scaffold_533_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1722..2546
DNA (825bp) protein (275aa)
Glycosyltransferase family 5 n=7 Tax=Bacteroides RepID=A6L4C2_BACV8
glycosyl transferase family protein
Starch synthase catalytic domain protein {ECO:0000313|EMBL:KDS32413.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_533_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2657..3937
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLH4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS45068.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_102_000M1_scaffold_533_5
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4187..4564)
DNA (378bp) protein (126aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6L4C0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO44065.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L3_102_000M1_scaffold_533_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4718..5842
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=A6L4B9_BACV8
DNA polymerase III subunit beta
L3_102_000M1_scaffold_533_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5894..6670
DNA (777bp) protein (259aa)
DNA Pol III epsilon chain n=13 Tax=Bacteroides RepID=A6L4B8_BACV8
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:KDS45071.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_533_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6667..7863
DNA (1197bp) protein (399aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EET17388.2}; EC=4.1.1.36 {ECO:0000313|EMBL:EET17388.2};; EC=6.3.2.5 {ECO:0000313|EMBL:EET17388.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=5 Tax=root RepID=C6Z929_9BACE
flavoprotein
L3_102_000M1_scaffold_533_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7979..9640
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Bacteroides RepID=A6L4B6_BACV8
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
DNA repair protein recN
L3_102_000M1_scaffold_533_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9691..10458
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bacteroides vulgatus RepID=D4V9F5_BACVU
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EOS04876.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA/rRNA methyltransferase
L3_102_000M1_scaffold_533_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10495..12195
DNA (1701bp) protein (567aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V9F4_BACVU
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KDS32404.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_102_000M1_scaffold_533_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12334..13638)
DNA (1305bp) protein (435aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLQ9_BACVU
tRNA(Ile)-lysidine synthetase
L3_102_000M1_scaffold_533_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13759..16227
DNA (2469bp) protein (823aa)
Ferrous iron transporter B n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLE2_BACVU
Ferrous iron transporter B {ECO:0000313|EMBL:EOS04873.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
iron transport, fusion membrane protein
L3_102_000M1_scaffold_533_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16909..17082
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLG7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS32400.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycosyltransferase
L3_102_000M1_scaffold_533_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17124..17315
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UM30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04871.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_102_000M1_scaffold_533_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18015..20243
DNA (2229bp) protein (743aa)
Formate acetyltransferase {ECO:0000313|EMBL:KDS45080.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KDS45080.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Formate acetyltransferase n=7 Tax=Bacteroides RepID=A6L4A8_BACV8
formate acetyltransferase
L3_102_000M1_scaffold_533_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20312..21040
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Pyruvate formate-lyase 1-activating enzyme n=3 Tax=Bacteroides RepID=C6Z7P9_9BACE
pyruvate formate-lyase 1 activating enzyme
L3_102_000M1_scaffold_533_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21142..21729)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z7P8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV65894.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_102_000M1_scaffold_533_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21733..23100)
DNA (1368bp) protein (456aa)
Electron transporter n=3 Tax=Bacteroides RepID=E5UYI3_9BACE
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EET16906.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
electron transport protein
L3_102_000M1_scaffold_533_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23097..23843)
DNA (747bp) protein (249aa)
Oxidoreductase n=7 Tax=Bacteroides RepID=E5UYI2_9BACE
Oxidoreductase {ECO:0000313|EMBL:EFV65892.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
oxidoreductase, glycolate oxidase
L3_102_000M1_scaffold_533_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24149..24760)
DNA (612bp) protein (204aa)
Transcriptional regulator n=6 Tax=Bacteroides RepID=A6L4A3_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04865.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_533_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24757..25452)
DNA (696bp) protein (232aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4A2_BACV8
hypothetical protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:KDS32393.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_000M1_scaffold_533_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25578..26042)
DNA (465bp) protein (155aa)
TspO/MBR family protein n=3 Tax=Bacteroides vulgatus RepID=D4V9E4_BACVU
outer membrane protein
TspO/MBR family protein {ECO:0000313|EMBL:KDS45088.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_102_000M1_scaffold_533_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26327..27052)
DNA (726bp) protein (242aa)
Two-component system response regulator n=5 Tax=Bacteroides RepID=A6L437_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04862.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_533_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27049..28104)
DNA (1056bp) protein (352aa)
Histidine kinase n=4 Tax=Bacteroides RepID=D4V9E2_BACVU
two-component system sensor histidine kinase
Uncharacterized protein {ECO:0000313|EMBL:EOS04861.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_102_000M1_scaffold_533_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28298..29518)
DNA (1221bp) protein (407aa)
ABC transporter permease protein n=6 Tax=Bacteroides RepID=A6L435_BACV8
ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:ABR40449.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_533_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29537..30280)
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=4 Tax=Bacteroides RepID=C6Z7N9_9BACE
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFG17582.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_102_000M1_scaffold_533_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30322..31530)
DNA (1209bp) protein (403aa)
Periplasmic component of efflux system n=2 Tax=Bacteroides vulgatus RepID=A6L433_BACV8
periplasmic protein of efflux system
Periplasmic component of efflux system {ECO:0000313|EMBL:ABR40447.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_533_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31570..32913)
DNA (1344bp) protein (448aa)
Outer membrane efflux protein n=2 Tax=Bacteroides vulgatus RepID=A6L432_BACV8
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABR40446.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_102_000M1_scaffold_533_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33067..33285
DNA (219bp) protein (73aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z7N6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY83103.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
membrane protein
Displaying items 1-30 of 103 in total

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