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L3_102_000M1_scaffold_548

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_548_1
unknown

Not on your lists

comp(2..469)
DNA (468bp) protein (156aa)

This feature has no annotations

L3_102_000M1_scaffold_548_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(481..1164)
DNA (684bp) protein (228aa)
Flp pilus assembly protein CpaB id=4491207 bin=GWF2_Clostridiales_38_85 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
cpaB; pilus assembly protein, Flp-type
Tax=GWF2_Clostridiales_38_85_curated
L3_102_000M1_scaffold_548_3
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(1172..2146)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=4491206 bin=GWF2_Clostridiales_38_85 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L3_102_000M1_scaffold_548_4
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2143..3381)
DNA (1239bp) protein (413aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Enolase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4N9_9BACE
enolase
L3_102_000M1_scaffold_548_5
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3692..5590
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62330.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
cleaved adhesin domain protein
L3_102_000M1_scaffold_548_6
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5810..5938
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EU04_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96023.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_102_000M1_scaffold_548_7
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5942..6457)
DNA (516bp) protein (172aa)
50S ribosomal protein L17 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EXL3_9BACE
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L17
L3_102_000M1_scaffold_548_8
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6462..7454)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Bacteroidales RepID=K0WSP9_9PORP
DNA-directed RNA polymerase subunit alpha
L3_102_000M1_scaffold_548_9
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7466..8071)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=2 Tax=Bacteroidales RepID=K0WSF3_9PORP
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_102_000M1_scaffold_548_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8192..8581)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Bacteroidales RepID=K0X3R8_9PORP
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S11
L3_102_000M1_scaffold_548_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8591..8971)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=2 Tax=Bacteroidales RepID=K0XEE9_9PORP
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
30S ribosomal protein S13
L3_102_000M1_scaffold_548_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9010..9126)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=2 Tax=Bacteroidales RepID=K0WVR9_9PORP
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L36
L3_102_000M1_scaffold_548_13
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9138..9356)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Bacteroidales RepID=K0WSQ4_9PORP
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
infA; translation initiation factor IF-1
L3_102_000M1_scaffold_548_14
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9364..10146)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Methionine aminopeptidase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WSF9_9PORP
methionine aminopeptidase
L3_102_000M1_scaffold_548_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10162..11484)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=2 Tax=Bacteroidales RepID=K0X3R9_9PORP
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
preprotein translocase subunit SecY
L3_102_000M1_scaffold_548_16
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11489..11935)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEF5_9PORP
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L15
L3_102_000M1_scaffold_548_17
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11966..12142)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=2 Tax=Bacteroidales RepID=K0WVS2_9PORP
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L30
L3_102_000M1_scaffold_548_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12158..12676)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETR0_9BACE
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S5
L3_102_000M1_scaffold_548_19
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12682..13023)
DNA (342bp) protein (114aa)
50S ribosomal protein L18 n=2 Tax=Bacteroidales RepID=K0WSG5_9PORP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L18
L3_102_000M1_scaffold_548_20
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13043..13597)
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=2 Tax=Bacteroidales RepID=K0X3S3_9PORP
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L6
L3_102_000M1_scaffold_548_21
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13617..14012)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=2 Tax=Bacteroidales RepID=K0XEG1_9PORP
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S8
L3_102_000M1_scaffold_548_22
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14071..14340)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=2 Tax=Bacteroidales RepID=K0WVS5_9PORP
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_102_000M1_scaffold_548_23
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14344..14901)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=2 Tax=Bacteroidales RepID=K0WSR5_9PORP
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L5
L3_102_000M1_scaffold_548_24
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14901..15221)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=2 Tax=Bacteroidales RepID=K0WSH1_9PORP
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L24
L3_102_000M1_scaffold_548_25
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15243..15608)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=2 Tax=Bacteroidales RepID=K0X3S5_9PORP
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_102_000M1_scaffold_548_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15611..15868)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Bacteroidales RepID=K0XEG7_9PORP
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S17
L3_102_000M1_scaffold_548_27
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15886..16083)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=2 Tax=Bacteroidales RepID=K0WVS9_9PORP
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L29
L3_102_000M1_scaffold_548_28
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16087..16518)
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=2 Tax=Bacteroidales RepID=K0WSS0_9PORP
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_102_000M1_scaffold_548_29
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16532..17257)
DNA (726bp) protein (242aa)
30S ribosomal protein S3 n=2 Tax=Bacteroidales RepID=K0WSH7_9PORP
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
30S ribosomal protein S3
L3_102_000M1_scaffold_548_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17265..17675)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=2 Tax=Bacteroidales RepID=K0X3S9_9PORP
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
50S ribosomal protein L22
Displaying items 1-30 of 97 in total

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