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L3_102_000M1_scaffold_728

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_728_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TFC0_9FIRM
Soj protein {ECO:0000313|EMBL:CCY11488.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Soj protein
L3_102_000M1_scaffold_728_2
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(467..835)
DNA (369bp) protein (123aa)
VRR-NUC domain protein n=3 Tax=Clostridiales RepID=A7B3C0_RUMGN
VRR-NUC domain protein {ECO:0000313|EMBL:EEX20177.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
VRR-NUC domain-containing protein
L3_102_000M1_scaffold_728_3
unknown

Not on your lists

comp(1136..1225)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_102_000M1_scaffold_728_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1227..1994)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6SPN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHF05051.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_102_000M1_scaffold_728_5
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2166..2672)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SBH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC57395.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_102_000M1_scaffold_728_6
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2669..2989)
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B3B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EEX20182.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L3_102_000M1_scaffold_728_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2979..3233)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YK17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12228.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_102_000M1_scaffold_728_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3223..3951)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12227.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
single-stranded DNA-binding protein
L3_102_000M1_scaffold_728_9
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3972..4271)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Blautia RepID=A7B3B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EEX20185.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_102_000M1_scaffold_728_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4284..4535)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XAK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12225.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_102_000M1_scaffold_728_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4541..4783)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YVH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12224.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_102_000M1_scaffold_728_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4780..5148)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YK12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12223.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_102_000M1_scaffold_728_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5120..5674)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Blautia RepID=A7B3B0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EEX20188.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_102_000M1_scaffold_728_14
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5646..5984)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Blautia RepID=A7B3A9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EEX20189.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_102_000M1_scaffold_728_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6312..6701)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9XAK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12220.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_102_000M1_scaffold_728_16
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6731..6925)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9YVG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC57344.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L3_102_000M1_scaffold_728_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7253..8029)
DNA (777bp) protein (259aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECN0_9FIRM
L3_102_000M1_scaffold_728_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(8140..9003)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EME5_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000313|EMBL:CDA98304.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L3_102_000M1_scaffold_728_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(9021..9917)
DNA (897bp) protein (299aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEI2_9FIRM
ABC transporter ATP-binding protein
L3_102_000M1_scaffold_728_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(9926..10789)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter related n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ENB6_9FIRM
ABC transporter
L3_102_000M1_scaffold_728_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

11016..11957
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F8B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98307.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_102_000M1_scaffold_728_22
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(12095..12700)
DNA (606bp) protein (202aa)
50S ribosomal protein L17 n=2 Tax=root RepID=R6EMF1_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
rplQ; 50S ribosomal protein L17
L3_102_000M1_scaffold_728_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(12854..13813)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DNA-directed RNA polymerase subunit alpha n=3 Tax=root RepID=R6EEI6_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_102_000M1_scaffold_728_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(13918..14511)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECP1_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
SSU ribosomal protein S4P
L3_102_000M1_scaffold_728_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(14643..15038)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEJ1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
30S ribosomal protein S11
L3_102_000M1_scaffold_728_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(15115..15486)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Firmicutes RepID=R6F8C2_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
30S ribosomal protein S13
L3_102_000M1_scaffold_728_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16068..17378)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01175.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_102_000M1_scaffold_728_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(17403..17621)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=root RepID=R6F8C7_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
translation initiation factor IF-1
L3_102_000M1_scaffold_728_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17670..17942)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W390_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01179.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_102_000M1_scaffold_728_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17988..18740)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=root RepID=R6WAG9_9CLOT
Displaying items 1-30 of 98 in total

View Taxonomy