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L3_102_000M1_scaffold_1263

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1263_1
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(80..205)
DNA (126bp) protein (42aa)
Helix-turn-helix domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDE2_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDB44559.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_102_000M1_scaffold_1263_2
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(308..1294)
DNA (987bp) protein (329aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5J6_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDB44560.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter permease
L3_102_000M1_scaffold_1263_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(1287..2399)
DNA (1113bp) protein (371aa)
Inner-membrane translocator n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGT5_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDB44561.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter permease
L3_102_000M1_scaffold_1263_4
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(2392..3930)
DNA (1539bp) protein (513aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2S1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB44562.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter ATP-binding protein
L3_102_000M1_scaffold_1263_5
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(4086..5315)
DNA (1230bp) protein (410aa)
Bmp family protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I352_9FIRM
Bmp family protein {ECO:0000313|EMBL:CDB44563.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Bmp family protein
L3_102_000M1_scaffold_1263_6
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(5655..6230)
DNA (576bp) protein (192aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDE6_9FIRM
L3_102_000M1_scaffold_1263_7
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

6457..7932
DNA (1476bp) protein (492aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5K1_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDB44565.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
sugar (glycoside-Pentoside-Hexuronide) transporter
L3_102_000M1_scaffold_1263_8
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

7929..8693
DNA (765bp) protein (255aa)
LmbE family protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGT8_9FIRM
LmbE family protein {ECO:0000313|EMBL:CDB44566.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
LmbE family protein
L3_102_000M1_scaffold_1263_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(8747..9181)
DNA (435bp) protein (145aa)
Fe-S iron-sulfur cluster assembly protein NifU family n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2S5_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CDB44567.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
iscU; iron-sulfur cluster assembly protein IscU
L3_102_000M1_scaffold_1263_10
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(9221..10408)
DNA (1188bp) protein (396aa)
Cysteine desulfurase NifS n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I356_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDB44568.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_102_000M1_scaffold_1263_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(10479..10904)
DNA (426bp) protein (142aa)
Transcriptional regulator Rrf2 family n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDF0_9FIRM
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDB44569.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
AsnC family transcriptional regulator
L3_102_000M1_scaffold_1263_12
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

11200..12402
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44570.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
sodium/hydrogen exchanger
L3_102_000M1_scaffold_1263_13
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

12585..13397
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44571.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ArtI; amino acid ABC transporter periplasmic protein
L3_102_000M1_scaffold_1263_14
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

13483..14130
DNA (648bp) protein (216aa)
Amino acid ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2S8_9FIRM
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB44572.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_102_000M1_scaffold_1263_15
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

14148..14921
DNA (774bp) protein (258aa)
Putative amino acid ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I360_9FIRM
Putative amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB44573.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative amino acid ABC transporter ATP-binding protein
L3_102_000M1_scaffold_1263_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

14918..15733
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44574.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_102_000M1_scaffold_1263_17
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

15776..16558
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44575.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_102_000M1_scaffold_1263_18
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(16606..17415)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44576.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
protein tyrosine phosphatase
L3_102_000M1_scaffold_1263_19
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(17412..18857)
DNA (1446bp) protein (482aa)
3-dehydroquinate synthase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2T2_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CDB44577.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
3-dehydroquinate synthase
L3_102_000M1_scaffold_1263_20
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(18878..20371)
DNA (1494bp) protein (498aa)
Xylulokinase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I363_9FIRM
Xylulokinase {ECO:0000313|EMBL:CDB44578.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
xylulokinase
L3_102_000M1_scaffold_1263_21
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(20471..21793)
DNA (1323bp) protein (441aa)
Ethanolamin permease n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDF9_9FIRM
Ethanolamin permease {ECO:0000313|EMBL:CDB44579.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ethanolamine:proton symporter, EAT family
L3_102_000M1_scaffold_1263_22
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(21851..22522)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX70613.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L3_102_000M1_scaffold_1263_23
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(22960..23463)
DNA (504bp) protein (168aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J1I4_9FIRM
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:CDB44112.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_102_000M1_scaffold_1263_24
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(23518..24189)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX70613.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L3_102_000M1_scaffold_1263_25
unknown

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comp(24238..24390)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_102_000M1_scaffold_1263_26
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

24812..25564
DNA (753bp) protein (251aa)
Glucitol operon repressor n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CRR0_9FIRM
Glucitol operon repressor {ECO:0000313|EMBL:CCX70610.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
glucitol operon repressor
L3_102_000M1_scaffold_1263_27
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

25949..27505
DNA (1557bp) protein (519aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D8R9_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
putative sodium/solute symporter
L3_102_000M1_scaffold_1263_28
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

27957..28109
DNA (153bp) protein (51aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EPX2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
putative sodium/solute symporter
Displaying 28 items

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