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L3_102_000M1_scaffold_1996

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1996_1
unknown

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2..145
DNA (144bp) protein (48aa)

This feature has no annotations

L3_102_000M1_scaffold_1996_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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161..604
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY6_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:CBK96205.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_102_000M1_scaffold_1996_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1118..1594)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T035_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52236.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L3_102_000M1_scaffold_1996_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1618..1995)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15667.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_1996_5
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1988..2350)
DNA (363bp) protein (121aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YNF4_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDA28385.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
Predicted transcriptional regulators
L3_102_000M1_scaffold_1996_6
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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2730..3320
DNA (591bp) protein (197aa)
A-agglutinin attachment subunit, putative n=1 Tax=Trichomonas vaginalis RepID=A2DMT1_TRIVA
A-agglutinin attachment subunit, putative {ECO:0000313|EMBL:EAY18302.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
L3_102_000M1_scaffold_1996_7
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3945..4394
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37778.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_102_000M1_scaffold_1996_8
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4401..5819
DNA (1419bp) protein (473aa)
serine threonine protein phosphatase 5 (EC:3.1.3.16)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MMV4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY93065.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
L3_102_000M1_scaffold_1996_9
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6251..7171
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5N7D0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY93067.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
hypothetical protein
L3_102_000M1_scaffold_1996_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7153..8985
DNA (1833bp) protein (611aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9I1_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL16276.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_1996_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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8972..9238
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7K0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74799.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_102_000M1_scaffold_1996_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9404..10696)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01635.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_102_000M1_scaffold_1996_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10699..11406)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NAS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC03361.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
sensory transduction protein LytT
L3_102_000M1_scaffold_1996_14
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11607..11762
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L062_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66472.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L3_102_000M1_scaffold_1996_15
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11762..12340
DNA (579bp) protein (193aa)
Accessory gene regulator B n=1 Tax=Clostridium sp. CAG:678 RepID=R5L235_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:CCY67092.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L3_102_000M1_scaffold_1996_16
unknown

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12518..12970
DNA (453bp) protein (151aa)

This feature has no annotations

L3_102_000M1_scaffold_1996_17
unknown

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13032..14081
DNA (1050bp) protein (350aa)

This feature has no annotations

L3_102_000M1_scaffold_1996_18
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14089..15201
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8E5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD49743.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L3_102_000M1_scaffold_1996_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15214..15885
DNA (672bp) protein (224aa)
ABC transporter ATPase component (EC:3.6.3.-)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002E681FB
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC67247.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_102_000M1_scaffold_1996_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16204..17274
DNA (1071bp) protein (357aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQR1_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCX82600.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Sugar-binding periplasmic protein
L3_102_000M1_scaffold_1996_21
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17664..18716
DNA (1053bp) protein (351aa)
Extracellular solute-binding protein family 1 n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NZV6_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDC03237.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_102_000M1_scaffold_1996_22
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18726..19592
DNA (867bp) protein (289aa)
ABC-type sugar transport system permease component n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NAC2_9FIRM
ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDC03236.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
sugar ABC transporter permease
L3_102_000M1_scaffold_1996_23
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19604..20440
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MWM0_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC03235.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
binding-protein-dependent transport systems inner membrane component
L3_102_000M1_scaffold_1996_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20452..20862
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E365_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82596.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_102_000M1_scaffold_1996_25
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20866..22017
DNA (1152bp) protein (384aa)
Trypanosome RHS n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N4J3_9FIRM
Trypanosome RHS {ECO:0000313|EMBL:CDC03234.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_102_000M1_scaffold_1996_26
unknown

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22054..22716
DNA (663bp) protein (221aa)

This feature has no annotations

L3_102_000M1_scaffold_1996_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22905..23351
DNA (447bp) protein (149aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Firmicutes RepID=H1BDT0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO23345.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_102_000M1_scaffold_1996_28
unknown

Not on your lists

23852..24136
DNA (285bp) protein (95aa)

This feature has no annotations

L3_102_000M1_scaffold_1996_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24226..25746
DNA (1521bp) protein (507aa)
Resolvase n-terminal:recombinase putative n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIP1_9FIRM
Resolvase n-terminal:recombinase putative {ECO:0000313|EMBL:CCY91585.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
resolvase, n-terminal:recombinase
L3_102_000M1_scaffold_1996_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25758..26642
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MPJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91584.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Putative recombinase
Displaying items 1-30 of 67 in total

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