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L3_102_000M1_scaffold_808

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_808_1
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(234..836)
DNA (603bp) protein (201aa)
Radical SAM superfamily n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N8T5_9FIRM
Radical SAM superfamily {ECO:0000313|EMBL:CDC02726.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Radical SAM superfamily.
L3_102_000M1_scaffold_808_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(863..1435)
DNA (573bp) protein (191aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Glutamine amidotransferase subunit PdxT n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MVA9_9FIRM
glutamine amidotransferase subunit PdxT
L3_102_000M1_scaffold_808_3
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1438..2310)
DNA (873bp) protein (291aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N375_9FIRM
L3_102_000M1_scaffold_808_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2348..2902)
DNA (555bp) protein (185aa)
Predicted membrane protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSP7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC02723.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Predicted membrane protein
L3_102_000M1_scaffold_808_5
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2912..3763)
DNA (852bp) protein (284aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal/pyridoxine/pyridoxamine kinase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NYD3_9FIRM
L3_102_000M1_scaffold_808_6
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4360..4965)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N8T3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC02721.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Transcriptional regulator
L3_102_000M1_scaffold_808_7
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5158..5937
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MVA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02720.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_102_000M1_scaffold_808_8
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6598..7626)
DNA (1029bp) protein (343aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N373_9FIRM
L3_102_000M1_scaffold_808_9
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7688..8179)
DNA (492bp) protein (164aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSP3_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDC02718.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_102_000M1_scaffold_808_10
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8192..9814)
DNA (1623bp) protein (541aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NYC8_9FIRM
L3_102_000M1_scaffold_808_11
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..10519)
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N8S8_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Predicted membrane protein
L3_102_000M1_scaffold_808_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10997..11323)
DNA (327bp) protein (109aa)
Sulfurtransferase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3T8_9FIRM
Sulfurtransferase {ECO:0000313|EMBL:CDC02949.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_102_000M1_scaffold_808_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11330..12595)
DNA (1266bp) protein (422aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT92_9FIRM
L3_102_000M1_scaffold_808_14
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12612..13787)
DNA (1176bp) protein (392aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NZ17_9FIRM
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CDC02947.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_102_000M1_scaffold_808_15
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13813..14529)
DNA (717bp) protein (239aa)
IMP cyclohydrolase-like protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N9E1_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CDC02946.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
IMP cyclohydrolase-like protein.
L3_102_000M1_scaffold_808_16
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14544..15170)
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MVU0_9FIRM
L3_102_000M1_scaffold_808_17
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15170..16204)
DNA (1035bp) protein (345aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3T3_9FIRM
L3_102_000M1_scaffold_808_18
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16221..17672)
DNA (1452bp) protein (484aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
purF; Amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT89_9FIRM
L3_102_000M1_scaffold_808_19
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17669..18166)
DNA (498bp) protein (166aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NZ11_9FIRM
L3_102_000M1_scaffold_808_20
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18500..19894)
DNA (1395bp) protein (465aa)
Predicted membrane protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N9D7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC02941.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Predicted membrane protein
L3_102_000M1_scaffold_808_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19980..20885)
DNA (906bp) protein (302aa)
Membrane protease subunits, stomatin/prohibitin homologs n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8C9_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:CBL15874.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_808_22
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20907..21353)
DNA (447bp) protein (149aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MVS3_9FIRM
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:CDC02925.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Membrane protein implicated in regulation of membrane protease activity
L3_102_000M1_scaffold_808_23
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21700..22293
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02924.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_102_000M1_scaffold_808_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22370..22747)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6F1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15196.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_808_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22758..24179)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6F0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15195.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_102_000M1_scaffold_808_26
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24220..25323)
DNA (1104bp) protein (368aa)
radical SAM protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035EC97D
radical SAM protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84863.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_102_000M1_scaffold_808_27
unknown

Not on your lists

comp(25352..25510)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_102_000M1_scaffold_808_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26144
DNA (360bp) protein (120aa)
Helix-turn-helix n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWI2_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CCX83284.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Helix-turn-helix.
L3_102_000M1_scaffold_808_29
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26260..26520)
DNA (261bp) protein (87aa)
Pro-sigmaK processing inhibitor BofA n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT72_9FIRM
Pro-sigmaK processing inhibitor BofA {ECO:0000313|EMBL:CDC02923.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_102_000M1_scaffold_808_30
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26770..27027)
DNA (258bp) protein (86aa)
Protein translocase SecG subunit n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NYZ0_9FIRM
Protein translocase SecG subunit {ECO:0000313|EMBL:CDC02922.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
protein translocase, SecG subunit
Displaying items 1-30 of 74 in total

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