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L3_102_000M1_scaffold_1016

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1016_1
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..337
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2WDP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERL22791.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
hypothetical protein
L3_102_000M1_scaffold_1016_2
unknown

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334..486
DNA (153bp) protein (51aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_3
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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455..1933
DNA (1479bp) protein (493aa)
NlpC/P60 family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EZH9_CLOS4
NlpC/P60 family protein {ECO:0000313|EMBL:ERI98456.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
NLP/P60 protein
L3_102_000M1_scaffold_1016_4
unknown

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1937..2203
DNA (267bp) protein (89aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2501..3712
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YPM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09697.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_102_000M1_scaffold_1016_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3999..5120
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0GAH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR45509.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_102_000M1_scaffold_1016_7
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5092..5916
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6S5A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55130.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_102_000M1_scaffold_1016_8
Grimontia indica, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6537..7283)
DNA (747bp) protein (249aa)
Putative transcriptional regulator, XRE family n=1 Tax=Grimontia sp. AK16 RepID=R1IIX2_9GAMM
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:EOD77382.1}; TaxID=1056512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia indica.;"
helix-turn-helix domain-containing protein
L3_102_000M1_scaffold_1016_9
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7456..7656
DNA (201bp) protein (67aa)
Helix-turn-helix domain protein n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S5U3_CALKI
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADQ41603.1}; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 /; I77R1B).;"
L3_102_000M1_scaffold_1016_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7659..9710
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50895.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_1016_11
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9733..10119
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SX49_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY56909.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_102_000M1_scaffold_1016_12
unknown

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10209..10553
DNA (345bp) protein (115aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10567..11580
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32175.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative bacteriophage DNA transposition protein B
L3_102_000M1_scaffold_1016_14
unknown

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11596..11793
DNA (198bp) protein (66aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11881..12873
DNA (993bp) protein (331aa)
IstB domain protein ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9D3_9FIRM
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:CDE48205.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
IstB domain-containing protein ATP-binding protein
L3_102_000M1_scaffold_1016_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12882..13394
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46080.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Bacteriophage Mu Gam like protein.
L3_102_000M1_scaffold_1016_17
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13408..13824
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Brevibacillus sp. CF112 RepID=J3AVU3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EJL38966.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
Protein of unknown function (DUF1018).
L3_102_000M1_scaffold_1016_18
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13838..14152
DNA (315bp) protein (105aa)
Mor transcription activator domain protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SX47_SYNGF
Mor transcription activator domain-containing protein
Mor transcription activator domain protein {ECO:0000313|EMBL:ADY56907.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_102_000M1_scaffold_1016_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14250..14540
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI0003821CDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40380.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_102_000M1_scaffold_1016_20
unknown

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14542..14871
DNA (330bp) protein (110aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14875..15447
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32167.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF3486).
L3_102_000M1_scaffold_1016_22
unknown

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15437..15952
DNA (516bp) protein (172aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16295..17647
DNA (1353bp) protein (451aa)
Phage terminase large subunit PBSX family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I0M1_9FIRM
Phage terminase large subunit PBSX family {ECO:0000313|EMBL:CDB42850.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
phage terminase large subunit
L3_102_000M1_scaffold_1016_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17647..19089
DNA (1443bp) protein (481aa)
Phage portal , SPP1 Gp6-like family protein n=5 Tax=Clostridium difficile RepID=T2YCC5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGG81074.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Phage portal protein, SPP1 Gp6-like
L3_102_000M1_scaffold_1016_25
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19127..19591
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BGSC 6E1 RepID=C2NRM6_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EEK53326.1}; TaxID=526970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BGSC 6E1.;"
hypothetical protein
L3_102_000M1_scaffold_1016_26
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19758..20852
DNA (1095bp) protein (365aa)
Putative head morphogenesis protein n=1 Tax=Clostridium phage phiCTP1 RepID=D9ZND0_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KGG81073.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
L3_102_000M1_scaffold_1016_27
unknown

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20883..21542
DNA (660bp) protein (220aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_28
unknown

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21529..21720
DNA (192bp) protein (64aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_29
unknown

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21797..22336
DNA (540bp) protein (180aa)

This feature has no annotations

L3_102_000M1_scaffold_1016_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22361..23284
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=A8RSX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGJ45289.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Lj928 prophage protein
Displaying items 1-30 of 42 in total

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