ggKbase home page

L3_102_000M1_scaffold_1100

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1100_1
unknown

Not on your lists

105..701
DNA (597bp) protein (199aa)

This feature has no annotations

L3_102_000M1_scaffold_1100_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

738..1373
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51684.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_102_000M1_scaffold_1100_3
unknown

Not on your lists

1415..2272
DNA (858bp) protein (286aa)

This feature has no annotations

L3_102_000M1_scaffold_1100_4
unknown

Not on your lists

2269..3318
DNA (1050bp) protein (350aa)

This feature has no annotations

L3_102_000M1_scaffold_1100_5
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3354..3935
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6STB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC64458.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_102_000M1_scaffold_1100_6
unknown

Not on your lists

3982..4428
DNA (447bp) protein (149aa)

This feature has no annotations

L3_102_000M1_scaffold_1100_7
unknown

Not on your lists

4579..5151
DNA (573bp) protein (191aa)

This feature has no annotations

L3_102_000M1_scaffold_1100_8
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5288..5755)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KN78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47870.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_102_000M1_scaffold_1100_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5752..6522)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T267_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95852.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_102_000M1_scaffold_1100_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6663..7559)
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCH5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EET61639.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
LysR substrate binding domain-containing protein
L3_102_000M1_scaffold_1100_11
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7695..8318
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C4B3_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CDC62662.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_102_000M1_scaffold_1100_12
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8311..9666
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GWI1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY17097.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
putative efflux protein, MATE family
L3_102_000M1_scaffold_1100_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

9755..10909
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22939.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative oxidoreductase of aldo/keto reductase family
L3_102_000M1_scaffold_1100_14
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11635..12933)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIP6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35531.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_102_000M1_scaffold_1100_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13042..13707)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50377.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_102_000M1_scaffold_1100_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13890..14105
DNA (216bp) protein (72aa)
DNA binding domain excisionase family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFI9_9FIRM
DNA binding domain excisionase family {ECO:0000313|EMBL:CDE50375.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_102_000M1_scaffold_1100_17
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14362..15783
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIP3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35528.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_102_000M1_scaffold_1100_18
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15969..16865)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05638.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_102_000M1_scaffold_1100_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17077..17457)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74957.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_102_000M1_scaffold_1100_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17725..18921)
DNA (1197bp) protein (399aa)
ATP-grasp domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3S3_9FIRM
ATP-grasp domain protein {ECO:0000313|EMBL:CDE46554.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Phosphoribosylamine-glycine ligase
L3_102_000M1_scaffold_1100_21
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19262..20020)
DNA (759bp) protein (253aa)
Putative esterase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLL4_9FIRM
Putative esterase {ECO:0000313|EMBL:EET58478.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_102_000M1_scaffold_1100_22
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(20207..20962)
DNA (756bp) protein (252aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJ45_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCX92700.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Predicted hydrolase of the alpha/beta superfamily
L3_102_000M1_scaffold_1100_23
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21233..22450
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMD7_TREBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE15699.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L3_102_000M1_scaffold_1100_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22524..23999
DNA (1476bp) protein (492aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I2T5_9FIRM
L3_102_000M1_scaffold_1100_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24238..24879
DNA (642bp) protein (214aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.18)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035C337E
Uncharacterized protein {ECO:0000313|EMBL:EHQ45156.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_102_000M1_scaffold_1100_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24941..26695
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHU6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05694.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
transporter
L3_102_000M1_scaffold_1100_27
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26695..27909
DNA (1215bp) protein (405aa)
Putative metallophosphoesterase (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EGS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE00712.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_102_000M1_scaffold_1100_28
unknown

Not on your lists

comp(28084..28848)
DNA (765bp) protein (255aa)
UPI0002F5F514 related cluster n=1 Tax=unknown RepID=UPI0002F5F514
L3_102_000M1_scaffold_1100_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28845..30119)
DNA (1275bp) protein (425aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CCO04848.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Enolase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CQS8_9FIRM
L3_102_000M1_scaffold_1100_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30362..30793)
DNA (432bp) protein (144aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4Q4_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CDE46466.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
SH3 domain protein
Displaying 30 items

View Taxonomy