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L3_102_000M1_scaffold_820

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_820_1
unknown

Not on your lists

2..115
DNA (114bp) protein (38aa)

This feature has no annotations

L3_102_000M1_scaffold_820_2
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(366..2402)
DNA (2037bp) protein (679aa)
glgB1; 1,4-alpha-glucan-branching enzyme 1 (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXH4_CLOCD
L3_102_000M1_scaffold_820_3
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2737..4602
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DBE1D
Putative uncharacterized protein {ECO:0000313|EMBL:EHB63971.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein
L3_102_000M1_scaffold_820_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4755..5465
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AK97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42269.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L3_102_000M1_scaffold_820_5
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5462..6892
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
histidine kinase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000374B0E8
PAS/PAC sensor signal transduction histidine kinase
L3_102_000M1_scaffold_820_6
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7006..7344
DNA (339bp) protein (113aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
histidine kinase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000374B0E8
hypothetical protein
L3_102_000M1_scaffold_820_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7630..8310)
DNA (681bp) protein (227aa)
Uncharacterized domain HDIG n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z200_9CLOT
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDD40215.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
uncharacterized domain HDIG
L3_102_000M1_scaffold_820_8
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(8352..9692)
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QI49_9FIRM
L3_102_000M1_scaffold_820_9
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9702..10373)
DNA (672bp) protein (224aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P3A6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCZ04176.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_102_000M1_scaffold_820_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10378..12171)
DNA (1794bp) protein (598aa)
Na/Pi-cotransporter n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB99_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CDE36929.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Na/Pi-cotransporter
L3_102_000M1_scaffold_820_11
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12341..12991)
DNA (651bp) protein (217aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KUZ2_9FIRM
phosphate uptake regulator, PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_102_000M1_scaffold_820_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13005..13760)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLU4_9FIRM
L3_102_000M1_scaffold_820_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13769..14599)
DNA (831bp) protein (277aa)
Phosphate ABC transporter, permease protein PstA n=2 Tax=Roseburia RepID=C0G049_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30577.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_102_000M1_scaffold_820_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14596..15474)
DNA (879bp) protein (293aa)
Phosphate ABC transporter n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H950_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CDE35910.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_102_000M1_scaffold_820_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15682..16545)
DNA (864bp) protein (288aa)
Phosphate ABC transporter phosphate-binding protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XN75_9FIRM
Phosphate ABC transporter phosphate-binding protein {ECO:0000313|EMBL:CDD07777.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_102_000M1_scaffold_820_16
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(16914..19043)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GWK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29868.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
M28 family peptidase
L3_102_000M1_scaffold_820_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19629..20939)
DNA (1311bp) protein (437aa)
Aspartyl/asparaginyl-tRNA synthetases (EC:6.1.1.12)
Aspartyl/asparaginyl-tRNA synthetases n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HV14_9FIRM
Aspartyl/asparaginyl-tRNA synthetases {ECO:0000313|EMBL:CDB41733.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_102_000M1_scaffold_820_18
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21225..23303)
DNA (2079bp) protein (693aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A086_MAHA5
translation elongation factor 2 (EF-2/EF-G)
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:AEE96920.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_102_000M1_scaffold_820_19
unknown

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23616..23717
DNA (102bp) protein (34aa)

This feature has no annotations

L3_102_000M1_scaffold_820_20
unknown

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comp(23795..24343)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI0002898853
hypothetical protein
L3_102_000M1_scaffold_820_21
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24373..24633)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2B8_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE96165.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_102_000M1_scaffold_820_22

Not on your lists

24847..26172
DNA (1326bp) protein (442aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=E9SKX4_CLOSY
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:AHF25416.1}; TaxID=1393376 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig11.;"
putative efflux protein, MATE family
L3_102_000M1_scaffold_820_23
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(26372..26848)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AAS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39798.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
diguanylate cyclase (GGDEF) domain
L3_102_000M1_scaffold_820_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27032..28183)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46766.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_102_000M1_scaffold_820_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28196..29287)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46766.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_102_000M1_scaffold_820_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29449..30345)
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8D5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
GTP-binding protein Era
L3_102_000M1_scaffold_820_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30368..30757)
DNA (390bp) protein (130aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endoribonuclease YbeY n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7N6_9FIRM
cytidine deaminase
L3_102_000M1_scaffold_820_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30763..31263)
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endoribonuclease YbeY n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7N6_9FIRM
hypothetical protein
L3_102_000M1_scaffold_820_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31260..33449)
DNA (2190bp) protein (730aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9B9_9FIRM
7TM receptor with intracellular metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE47868.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
HD superfamily hydrolase
L3_102_000M1_scaffold_820_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33412..34425)
DNA (1014bp) protein (338aa)
PhoH family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBI5_9FIRM
PhoH family protein {ECO:0000313|EMBL:CDE47867.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
PhoH; phosphate starvation-inducible protein PhoH, ATPase
Displaying items 1-30 of 42 in total

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