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L3_102_000M1_scaffold_1577

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1577_1
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B4J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59208.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_2
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(794..2950)
DNA (2157bp) protein (719aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
DNA topoisomerase 1 n=1 Tax=Clostridium sp. CAG:780 RepID=R5PMC8_9CLOT
DNA topoisomerase I, bacterial
L3_102_000M1_scaffold_1577_3
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3152..4504)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B8U7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59640.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_1577_4
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4646..4981)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BKM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59641.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_5
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5153..6301)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=root RepID=R6C2H9_9CLOT
L3_102_000M1_scaffold_1577_6
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6486..7625)
DNA (1140bp) protein (380aa)
Stage V sporulation protein E n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5Y4_9CLOT
Stage V sporulation protein E {ECO:0000313|EMBL:CDA59643.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
stage V sporulation protein E
L3_102_000M1_scaffold_1577_7
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7644..8633)
DNA (990bp) protein (330aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=2 Tax=root RepID=R6BFT7_9CLOT
L3_102_000M1_scaffold_1577_8
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8635..10107)
DNA (1473bp) protein (491aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium sp. CAG:245 RepID=R6B8V1_9CLOT
L3_102_000M1_scaffold_1577_9
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10491..11090
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BKM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59646.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_10
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11267..12262
DNA (996bp) protein (332aa)
D-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:245 RepID=R6C2I5_9CLOT
D-lactate dehydrogenase {ECO:0000313|EMBL:CDA59647.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_1577_11
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12338..14473)
DNA (2136bp) protein (712aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5Y8_9CLOT
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDA59648.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
cell division protein FtsI/penicillin-binding protein 2
L3_102_000M1_scaffold_1577_12
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14561..15070)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BFU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59649.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_1577_13
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15103..16041)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=root RepID=R6B8V7_9CLOT
rsmH; S-adenosyl-methyltransferase MraW
L3_102_000M1_scaffold_1577_14
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16433..16864)
DNA (432bp) protein (144aa)
Protein MraZ n=2 Tax=root RepID=R6BKM8_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
MraZ protein
L3_102_000M1_scaffold_1577_15
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17087..17878)
DNA (792bp) protein (264aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Clostridium sp. CAG:245 RepID=R6C2I9_9CLOT
L3_102_000M1_scaffold_1577_16
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18087..18554
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59653.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_17
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18744..18917)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B8W1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59655.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_18
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19098..19241)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BKN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59656.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_19
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19262..19642)
DNA (381bp) protein (127aa)
Putative permease n=1 Tax=Clostridium sp. CAG:245 RepID=R6C2J4_9CLOT
Putative permease {ECO:0000313|EMBL:CDA59657.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
putative permease
L3_102_000M1_scaffold_1577_20
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19671..20018)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59658.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_1577_21

Not on your lists


20175..20426
DNA (252bp) protein (84aa)
Ribosomal protein L28 n=2 Tax=root RepID=K1THK2_9ZZZZ
Ribosomal protein L28 {ECO:0000313|EMBL:EKC72532.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpmB; 50S ribosomal protein L28
L3_102_000M1_scaffold_1577_22
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20816..20971)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B8W6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59660.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_23
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21181..21804
DNA (624bp) protein (208aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
DNA lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:245 RepID=R6BKN7_9CLOT
L3_102_000M1_scaffold_1577_24
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21865..23076
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C2J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59662.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_1577_25
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23299..23544)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B603_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59663.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
Displaying 25 items

View Taxonomy