ggKbase home page

L3_102_000M1_scaffold_295

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_295_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

L3_102_000M1_scaffold_295_2
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1092..3158
DNA (2067bp) protein (689aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2L1_9CLOT
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CDA58488.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_295_3
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3299..4024
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GFX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25718.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
transposase
L3_102_000M1_scaffold_295_4
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4120..5769
DNA (1650bp) protein (550aa)
Glutamate--tRNA ligase n=2 Tax=root RepID=R6BZC7_9CLOT
Glutamate--tRNA ligase {ECO:0000313|EMBL:CDA58487.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
gltX; glutamyl-tRNA synthetase
L3_102_000M1_scaffold_295_5
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6436..7017)
DNA (582bp) protein (194aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium sp. CAG:245 RepID=R6BHC1_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L3_102_000M1_scaffold_295_6
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7242..8546)
DNA (1305bp) protein (435aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=root RepID=R6B5V2_9CLOT
L3_102_000M1_scaffold_295_7
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8821..10110)
DNA (1290bp) protein (430aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase n=1 Tax=Clostridium sp. CAG:245 RepID=R6BCC9_9CLOT
Serine-tRNA ligase {ECO:0000313|EMBL:CDA58484.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_8
unknown

Not on your lists

10480..11241
DNA (762bp) protein (254aa)

This feature has no annotations

L3_102_000M1_scaffold_295_9
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11363..12322
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger related-protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2K5_9CLOT
K+-dependent Na+/Ca+ exchanger related-protein {ECO:0000313|EMBL:CDA58483.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_10
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12283..12513
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58482.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_11
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13008..14852)
DNA (1845bp) protein (615aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2J9_9CLOT
L3_102_000M1_scaffold_295_12
unknown

Not on your lists

15309..15419
DNA (111bp) protein (37aa)

This feature has no annotations

L3_102_000M1_scaffold_295_13
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15600..17459
DNA (1860bp) protein (620aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:780 RepID=R5PQ46_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
uvrC; excinuclease ABC subunit C
L3_102_000M1_scaffold_295_14
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17595..17903
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58477.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_15
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18141..19034
DNA (894bp) protein (298aa)
Putative SAM-dependent methyltransferase n=2 Tax=root RepID=R6BHA6_9CLOT
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CDA58476.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
putative SAM-dependent methyltransferase
L3_102_000M1_scaffold_295_16
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19036..19764
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58475.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
pseudouridylate synthase
L3_102_000M1_scaffold_295_17
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19929..20555
DNA (627bp) protein (209aa)
Accessory gene regulator B n=1 Tax=Clostridium sp. CAG:245 RepID=R6BCC0_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:CDA58474.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
accessory gene regulator B
L3_102_000M1_scaffold_295_18
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20617..20736
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58473.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_19
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20846..22195)
DNA (1350bp) protein (450aa)
Histidine kinase n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q8Y5_9CLOT
Histidine kinase {ECO:0000313|EMBL:CCZ18726.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
histidine kinase
L3_102_000M1_scaffold_295_20
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22179..22817)
DNA (639bp) protein (213aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2G8_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDA58453.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
LytTR family transcriptional regulator
L3_102_000M1_scaffold_295_21
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23125..23622
DNA (498bp) protein (166aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZ92_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA58452.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_22
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23886..24722
DNA (837bp) protein (279aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. CAG:245 RepID=R6BH75_9CLOT
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:CDA58451.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
delta-lactam-biosynthetic de-N-acetylase
L3_102_000M1_scaffold_295_23
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24745..25062
DNA (318bp) protein (106aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5R2_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:CDA58450.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
yqfC; sporulation protein YqfC
L3_102_000M1_scaffold_295_24
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25044..26261
DNA (1218bp) protein (406aa)
Sporulation protein YqfD n=1 Tax=Clostridium sp. CAG:245 RepID=R6BC91_9CLOT
Sporulation protein YqfD {ECO:0000313|EMBL:CDA58449.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
sporulation protein YqfD
L3_102_000M1_scaffold_295_25
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26242..27474
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58448.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_295_26
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27493..27978
DNA (486bp) protein (162aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
ybeY; endoribonuclease YbeY (EC:3.1.-.-)
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZ90_9CLOT
L3_102_000M1_scaffold_295_27
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27991..28743
DNA (753bp) protein (251aa)
Diacylglycerol kinase n=1 Tax=Clostridium sp. CAG:245 RepID=R6BH68_9CLOT
Diacylglycerol kinase {ECO:0000313|EMBL:CDA58446.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
diacylglycerol kinase
L3_102_000M1_scaffold_295_28
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28801..29880
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B5Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58445.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_295_29
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30007..30522
DNA (516bp) protein (172aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:245 RepID=R6BC85_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDA58444.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
NUDIX hydrolase
L3_102_000M1_scaffold_295_30
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30514..31242)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2F6_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
DNA replication and repair protein RecO
Displaying items 1-30 of 114 in total

View Taxonomy