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L3_102_000M1_scaffold_683

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_683_1
unknown

Not on your lists

639..797
DNA (159bp) protein (53aa)

This feature has no annotations

L3_102_000M1_scaffold_683_2
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(860..2056)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BJZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59421.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_3
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..3183)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B878_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59420.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_4
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4060..5013
DNA (954bp) protein (318aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium sp. CAG:245 RepID=R6BF51_9CLOT
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CDA59419.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_5
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5131..6096
DNA (966bp) protein (322aa)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium sp. CAG:245 RepID=R6B484_9CLOT
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:CDA59058.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
RNA methylase
L3_102_000M1_scaffold_683_6
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6150..7028
DNA (879bp) protein (293aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:245 RepID=R6C0W4_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hslO; Hsp33-like chaperonin
L3_102_000M1_scaffold_683_7
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7068..7730
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BJ06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59056.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_683_8
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7866..9281
DNA (1416bp) protein (472aa)
Surface protein C n=1 Tax=Clostridium sp. CAG:245 RepID=R6B7C9_9CLOT
Surface protein C {ECO:0000313|EMBL:CDA59055.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_9
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9431..10699)
DNA (1269bp) protein (423aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
Enolase n=1 Tax=Clostridium sp. CAG:245 RepID=R6BE23_9CLOT
phosphopyruvate hydratase
L3_102_000M1_scaffold_683_10
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11007..11816
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B480_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59053.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_683_11
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12044..12715
DNA (672bp) protein (224aa)
Thymidylate synthase complementing protein ThyX n=2 Tax=root RepID=R6C0W1_9CLOT
Thymidylate synthase complementing protein ThyX {ECO:0000313|EMBL:CDA59052.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
thymidylate synthase complementing protein ThyX
L3_102_000M1_scaffold_683_12
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12733..13584
DNA (852bp) protein (284aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=2 Tax=root RepID=R6BJ01_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_13
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13730..14398
DNA (669bp) protein (223aa)
DNA protecting protein DprA n=1 Tax=Clostridium sp. CAG:245 RepID=R6B7C5_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:CDA59050.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
DNA protecting protein DprA
L3_102_000M1_scaffold_683_14
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14479..15405
DNA (927bp) protein (309aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Clostridium sp. CAG:245 RepID=R6BE18_9CLOT
L3_102_000M1_scaffold_683_15
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15467..16369)
DNA (903bp) protein (301aa)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:245 RepID=R6B475_9CLOT
Pseudouridine synthase {ECO:0000313|EMBL:CDA59048.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
RluA family pseudouridine synthase
L3_102_000M1_scaffold_683_16
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16594..17313
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C0V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59047.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_17
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17530..17814
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:245 RepID=R6BIZ8_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
rpsF; 30S ribosomal protein S6
L3_102_000M1_scaffold_683_18
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17837..18265
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B7C1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
single-strand binding protein
L3_102_000M1_scaffold_683_19
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18296..18574
DNA (279bp) protein (93aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:245 RepID=R6BE16_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
SSU ribosomal protein S18P
L3_102_000M1_scaffold_683_20
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18693..19031
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B472_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59043.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_21
unknown

Not on your lists

19205..19639
DNA (435bp) protein (145aa)

This feature has no annotations

L3_102_000M1_scaffold_683_22
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19698..20303)
DNA (606bp) protein (202aa)
Sortase family protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B303_9CLOT
Sortase family protein {ECO:0000313|EMBL:CDA58643.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L3_102_000M1_scaffold_683_23
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20445..21158
DNA (714bp) protein (238aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
Uridylate kinase n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZU8_9CLOT
uridylate kinase
L3_102_000M1_scaffold_683_24
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21164..21712
DNA (549bp) protein (183aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. CAG:245 RepID=R6BHT0_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
ribosome recycling factor
L3_102_000M1_scaffold_683_25
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21773..22504
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium sp. CAG:245 RepID=R6B685_9CLOT
L3_102_000M1_scaffold_683_26
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22529..23332
DNA (804bp) protein (268aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Clostridium sp. CAG:780 RepID=R5QAC6_9CLOT
L3_102_000M1_scaffold_683_27
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23388..24179
DNA (792bp) protein (264aa)
RIP metalloprotease RseP n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZU4_9CLOT
RIP metalloprotease RseP {ECO:0000313|EMBL:CDA58637.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
putative metalloprotease
L3_102_000M1_scaffold_683_28
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24233..28780
DNA (4548bp) protein (1516aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
DNA polymerase III polC-type n=2 Tax=root RepID=R6BHS5_9CLOT
L3_102_000M1_scaffold_683_29
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28838..29212
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B684_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58635.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_683_30
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29260..30414)
DNA (1155bp) protein (385aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q985_9CLOT
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:CCZ17662.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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