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L3_102_000M1_scaffold_2924

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2924_1
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..2331
DNA (2331bp) protein (777aa)
DNA mismatch repair protein MutS n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZD7_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
DNA mismatch repair protein MutS
L3_102_000M1_scaffold_2924_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2522..4432
DNA (1911bp) protein (637aa)
DNA mismatch repair protein MutL n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8P8_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA mismatch repair protein MutL
L3_102_000M1_scaffold_2924_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4432..5385
DNA (954bp) protein (318aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNC8_9CLOT
L3_102_000M1_scaffold_2924_4
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5382..6698
DNA (1317bp) protein (439aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Roseburia sp. CAG:45 RepID=R6NPE5_9FIRM
Cystathionine beta-lyase family protein involved in aluminum resistance {ECO:0000313|EMBL:CDC10259.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_102_000M1_scaffold_2924_5
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6770..7459
DNA (690bp) protein (230aa)
DNA repair protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWB5_9FIRM
DNA repair protein {ECO:0000313|EMBL:CDF41590.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
DNA replication and repair protein RadC
L3_102_000M1_scaffold_2924_6
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7479..8492
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PKF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10262.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Actin-like ATPase involved in cell morphogenesis
L3_102_000M1_scaffold_2924_7
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8501..9376
DNA (876bp) protein (292aa)
Cell shape-determining protein MreC n=1 Tax=Eubacterium sp. 14-2 RepID=S0JIN4_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
rod shape-determining protein MreC
L3_102_000M1_scaffold_2924_8
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9379..9897
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NGH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10265.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rod shape-determining protein MreD
L3_102_000M1_scaffold_2924_9
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9890..12736
DNA (2847bp) protein (949aa)
Putative penicillin binding protein transpeptidase domain protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NDK9_9FIRM
Putative penicillin binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC10268.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
peptidoglycan glycosyltransferase
L3_102_000M1_scaffold_2924_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12756..13436
DNA (681bp) protein (227aa)
Probable septum site-determining protein MinC n=1 Tax=Roseburia sp. CAG:45 RepID=R6NGH7_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
septum site-determining protein MinC
L3_102_000M1_scaffold_2924_11
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13449..13793
DNA (345bp) protein (115aa)
Site-determining protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6E6E4_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
septum site-determining protein MinD
Displaying 11 items

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