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L3_102_000M1_scaffold_3024

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_3024_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..447
DNA (447bp) protein (149aa)
Na(+)-transporting decarboxylase carboxyltransferase (EC:4.1.1.-)
Oxaloacetate decarboxylase, alpha subunit n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9D8_9FIRM
Oxaloacetate decarboxylase, alpha subunit {ECO:0000313|EMBL:EOS67276.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_102_000M1_scaffold_3024_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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712..1941
DNA (1230bp) protein (410aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXT5_9FIRM
L3_102_000M1_scaffold_3024_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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1972..3390
DNA (1419bp) protein (473aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SL27_9FIRM
L3_102_000M1_scaffold_3024_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3738..4040)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N373_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77483.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_102_000M1_scaffold_3024_5
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4296..5615)
DNA (1320bp) protein (440aa)
Possible ATPase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2Z3_9PROT
Possible ATPase {ECO:0000313|EMBL:CDE21794.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ATP/GTP-binding protein
L3_102_000M1_scaffold_3024_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6234..10016
DNA (3783bp) protein (1261aa)
Sortase B cell surface sorting signal n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D975_9FIRM
Sortase B cell surface sorting signal {ECO:0000313|EMBL:CCX73382.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_102_000M1_scaffold_3024_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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10100..11458
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31069.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_3024_8
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11610..11825
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. maculicola str. ES4326 RepID=F3HT38_PSEYM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGH62508.1}; TaxID=629265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. maculicola str. ES4326.;"
L3_102_000M1_scaffold_3024_9

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comp(11953..12213)
DNA (261bp) protein (87aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=human gut metagenome RepID=K1S737_9ZZZZ
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:EKC56447.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA-directed DNA polymerase
L3_102_000M1_scaffold_3024_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12663..13415
DNA (753bp) protein (251aa)
Methenyltetrahydrofolate synthetase domain-containing protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHA7_9FIRM
Methenyltetrahydrofolate synthetase domain-containing protein {ECO:0000313|EMBL:CDE50821.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
5-formyltetrahydrofolate cyclo-ligase
L3_102_000M1_scaffold_3024_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13394..14926
DNA (1533bp) protein (511aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV60_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ61904.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative ABC transporter ATP-binding protein
L3_102_000M1_scaffold_3024_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14923..15999
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97596.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC transporter permease
L3_102_000M1_scaffold_3024_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16001..16942
DNA (942bp) protein (314aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV58_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61902.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L3_102_000M1_scaffold_3024_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16977..18032
DNA (1056bp) protein (352aa)
Basic membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV57_9FIRM
Purine-binding protein {ECO:0000313|EMBL:KJJ72968.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
basic membrane lipoprotein
L3_102_000M1_scaffold_3024_15
unknown

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19017..19136
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 15 items

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