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L3_102_000M1_scaffold_2480

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2480_1
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1041)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TS42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70731.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_102_000M1_scaffold_2480_2
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1179..1787
DNA (609bp) protein (203aa)
Putative single-stranded DNA-binding protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TS38_9FIRM
Putative single-stranded DNA-binding protein {ECO:0000313|EMBL:CDC70726.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
ssb; putative single-stranded DNA-binding protein
L3_102_000M1_scaffold_2480_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(1838..3040)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14133.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_102_000M1_scaffold_2480_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3212..3688)
DNA (477bp) protein (159aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UMV2_9FIRM
hypothetical protein
L3_102_000M1_scaffold_2480_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3839..4135
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M955_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67599.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_102_000M1_scaffold_2480_6
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4137..5030
DNA (894bp) protein (298aa)
Radical SAM protein TIGR01212 family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TP63_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDC71579.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_102_000M1_scaffold_2480_7
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5076..6590)
DNA (1515bp) protein (505aa)
O-antigen polymerase family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TY61_9FIRM
O-antigen polymerase family protein {ECO:0000313|EMBL:CDC72856.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
O-antigen polymerase family protein
L3_102_000M1_scaffold_2480_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6600..7613)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MEW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66387.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative glycosyl transferase
L3_102_000M1_scaffold_2480_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7976..8623
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MBP4_9FIRM
L3_102_000M1_scaffold_2480_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8628..8981
DNA (354bp) protein (118aa)
Putative pyridoxal-phosphate-dependent enzyme n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UFQ0_9FIRM
Putative pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:CDC69602.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative pyridoxal-phosphate-dependent enzyme
L3_102_000M1_scaffold_2480_11
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8926..9198
DNA (273bp) protein (91aa)
Putative pyridoxal-phosphate-dependent enzyme n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UFQ0_9FIRM
Putative pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:CDC69602.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative pyridoxal-phosphate-dependent enzyme
L3_102_000M1_scaffold_2480_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9156..9485
DNA (330bp) protein (110aa)
Putative D-cysteine desulfhydrase n=2 Tax=Oscillibacter RepID=U2PVA5_9FIRM
Putative D-cysteine desulfhydrase {ECO:0000313|EMBL:ERK59304.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative pyridoxal-phosphate-dependent enzyme
L3_102_000M1_scaffold_2480_13
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9955..10554
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KTZ3_OSCVS
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_102_000M1_scaffold_2480_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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10887..11891
DNA (1005bp) protein (335aa)
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (EC:2.5.1.54)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47435.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_102_000M1_scaffold_2480_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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11888..12721
DNA (834bp) protein (278aa)
Prephenate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZQ1_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:CCX47434.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
prephenate dehydrogenase
L3_102_000M1_scaffold_2480_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

12718..13776
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00196467}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00196467};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3B3_9FIRM
L3_102_000M1_scaffold_2480_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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13773..15029
DNA (1257bp) protein (419aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B7M4_9FIRM
L3_102_000M1_scaffold_2480_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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15026..16081
DNA (1056bp) protein (352aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJ41_9FIRM
L3_102_000M1_scaffold_2480_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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16097..17236
DNA (1140bp) protein (380aa)
Chorismate mutase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVQ4_9FIRM
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:CCX47430.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_102_000M1_scaffold_2480_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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17236..18456
DNA (1221bp) protein (407aa)
aroE_aroK; shikimate dehydrogenase/shikimate kinase (EC:1.1.1.25 2.7.1.71)
Shikimate dehydrogenase/shikimate kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZP5_9FIRM
Shikimate dehydrogenase/shikimate kinase {ECO:0000313|EMBL:CCX47429.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_102_000M1_scaffold_2480_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18453..18887
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNL9_9FIRM
hypothetical protein
L3_102_000M1_scaffold_2480_22
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19401..19721)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI000358F12D
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
L3_102_000M1_scaffold_2480_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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19783..20310
DNA (528bp) protein (176aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D217_9FIRM
L3_102_000M1_scaffold_2480_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20307..22223
DNA (1917bp) protein (639aa)
selB; selenocysteine-specific translation elongation factor SelB (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9H9_9CLOT
Selenocysteine-specific translation elongation factor SelB {ECO:0000313|EMBL:CCX50934.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_2480_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22489..24018)
DNA (1530bp) protein (510aa)
Sodium/proline symporter n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5F7_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:EOS66210.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
sodium/proline symporter
L3_102_000M1_scaffold_2480_26
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24205..24795)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TQI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72024.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
TetR family transcriptional regulator
L3_102_000M1_scaffold_2480_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24998..26662
DNA (1665bp) protein (555aa)
Uridine kinase (EC:2.7.1.48)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64196.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_102_000M1_scaffold_2480_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26937..27869
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK99636.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cysteine synthase A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K037_9FIRM
L3_102_000M1_scaffold_2480_29
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27998..29005)
DNA (1008bp) protein (336aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TQA2_9FIRM
L3_102_000M1_scaffold_2480_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29045..29638)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QS34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62232.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 42 in total

View Taxonomy