ggKbase home page

L3_102_000M1_scaffold_1458

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1458_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..666
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66190.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
baseplate J-like family protein
L3_102_000M1_scaffold_1458_2
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

672..1241
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UR71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73277.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_102_000M1_scaffold_1458_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1245..1478
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08132.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_102_000M1_scaffold_1458_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1503..1769
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AY70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65100.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_102_000M1_scaffold_1458_5
unknown

Not on your lists

1790..2113
DNA (324bp) protein (108aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_6
unknown

Not on your lists

2106..2783
DNA (678bp) protein (226aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_7
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

2904..3740
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XEM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA13978.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L3_102_000M1_scaffold_1458_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3841..4740
DNA (900bp) protein (300aa)
GTPase Era n=2 Tax=Oscillibacter RepID=U2QFD2_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
era; GTP-binding protein Era
L3_102_000M1_scaffold_1458_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4999..5829)
DNA (831bp) protein (277aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Pyridoxal kinase n=2 Tax=Oscillibacter RepID=U2QE11_9FIRM
hypothetical protein
L3_102_000M1_scaffold_1458_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6046..7494)
DNA (1449bp) protein (483aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Oscillibacter RepID=U2S5H8_9FIRM
L3_102_000M1_scaffold_1458_11
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7829..8941)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67266.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_102_000M1_scaffold_1458_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9046..9462)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56765.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_102_000M1_scaffold_1458_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9694..10506
DNA (813bp) protein (271aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TEC4_9FIRM
L3_102_000M1_scaffold_1458_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10493..10933
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RR89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56768.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_102_000M1_scaffold_1458_15
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10968..12707
DNA (1740bp) protein (580aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TED1_9FIRM
L3_102_000M1_scaffold_1458_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13019..13726
DNA (708bp) protein (236aa)
Putative azaleucine resistance protein AzlC n=2 Tax=Oscillibacter RepID=U2QA03_9FIRM
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:ERK56772.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative branched-chain amino acid transport protein
L3_102_000M1_scaffold_1458_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13717..14052
DNA (336bp) protein (112aa)
Branched-chain amino acid transport protein AzlD n=2 Tax=Oscillibacter RepID=U2RR94_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:ERK56773.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative branched-chain amino acid transport protein
L3_102_000M1_scaffold_1458_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14089..14652
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56775.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_102_000M1_scaffold_1458_19
unknown

Not on your lists

comp(14871..15182)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(15193..15801)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H5N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23384.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
cytidylate kinase
L3_102_000M1_scaffold_1458_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15815..16561)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MA20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67536.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_102_000M1_scaffold_1458_22
unknown

Not on your lists

comp(16630..16905)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17021..17188
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2PT02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61090.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_102_000M1_scaffold_1458_24
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17300..18880
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M723_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
prfC; peptide chain release factor 3
L3_102_000M1_scaffold_1458_25
unknown

Not on your lists

18907..19077
DNA (171bp) protein (57aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_26
unknown

Not on your lists

19062..19283
DNA (222bp) protein (74aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19393..19815
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8T5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ41325.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
histidine triad (HIT) protein
L3_102_000M1_scaffold_1458_28
unknown

Not on your lists

19934..20263
DNA (330bp) protein (110aa)

This feature has no annotations

L3_102_000M1_scaffold_1458_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20338..20649
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Oscillibacter RepID=U2QNB0_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsJ; 30S ribosomal protein S10
L3_102_000M1_scaffold_1458_30
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20818..21537
DNA (720bp) protein (240aa)
50S ribosomal protein L3 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TWE1_9FIRM
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Displaying items 1-30 of 84 in total

View Taxonomy