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L3_102_000M1_scaffold_736

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_736_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..207
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74433.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

194..604
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74432.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

715..1164
DNA (450bp) protein (150aa)
Hydrolase NUDIX family n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZBA4_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CDA26077.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L3_102_000M1_scaffold_736_4
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1275..2147)
DNA (873bp) protein (291aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H408_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDE34404.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
hypothetical protein
L3_102_000M1_scaffold_736_5
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2358..3458
DNA (1101bp) protein (367aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BZV7_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA68745.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
MATE efflux family protein
L3_102_000M1_scaffold_736_6
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3461..4336
DNA (876bp) protein (292aa)
Putative oxidoreductase n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q889_9CLOT
Putative oxidoreductase {ECO:0000313|EMBL:CDC18147.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
2,5-diketo-D-gluconic acid reductase
L3_102_000M1_scaffold_736_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4349..4543
DNA (195bp) protein (65aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR45_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CCY44570.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_102_000M1_scaffold_736_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4641..5429
DNA (789bp) protein (263aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C902_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDD74425.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_102_000M1_scaffold_736_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5574..7445
DNA (1872bp) protein (624aa)
Repeat protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8F5_9CLOT
Repeat protein {ECO:0000313|EMBL:CDD74027.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Listeria/Bacterioides repeat
L3_102_000M1_scaffold_736_10
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7598..8035
DNA (438bp) protein (146aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:230 RepID=R6DLN5_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA85824.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Transcriptional regulators
L3_102_000M1_scaffold_736_11
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8037..9392
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DDG6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA85825.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
putative efflux protein, MATE family
L3_102_000M1_scaffold_736_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9400..9750
DNA (351bp) protein (117aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C995_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD74681.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_102_000M1_scaffold_736_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9907..10197
DNA (291bp) protein (97aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD0_9CLOT
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDD74682.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10277..10915
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74683.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_102_000M1_scaffold_736_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11047..11955
DNA (909bp) protein (303aa)
Putative lipoprotein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C941_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:CDD74684.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12028..12723
DNA (696bp) protein (232aa)
VanRG2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Q8_9CLOT
VanRG2 {ECO:0000313|EMBL:CDD74685.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
vanR; two-component response regulator
L3_102_000M1_scaffold_736_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12716..13834
DNA (1119bp) protein (373aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
VanSG2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9A0_9CLOT
hypothetical protein
L3_102_000M1_scaffold_736_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13946..16228
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74687.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16389..16490)
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLS4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92759.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_102_000M1_scaffold_736_20
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16612..16779
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IM31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52650.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L3_102_000M1_scaffold_736_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16867..17490
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74688.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_102_000M1_scaffold_736_22
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17481..17747
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NN81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ05625.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L3_102_000M1_scaffold_736_23
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17744..17980
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J4Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29239.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_102_000M1_scaffold_736_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17955..18275
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74690.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18259..18669
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74691.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
nucleotidyltransferase substrate binding protein, HI0074 family
L3_102_000M1_scaffold_736_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18954..19631
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74692.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_102_000M1_scaffold_736_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19721..20482
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=root RepID=R7CBL2_9CLOT
L3_102_000M1_scaffold_736_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20483..21646
DNA (1164bp) protein (388aa)
Cysteine desulfurase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C953_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:CDD74694.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cysteine desulfurase
L3_102_000M1_scaffold_736_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21659..22846
DNA (1188bp) protein (396aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9S0_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L3_102_000M1_scaffold_736_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22937..23170)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74696.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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