ggKbase home page

L3_102_000M1_scaffold_2758

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2758_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(45..2348)
DNA (2304bp) protein (768aa)
Bacterial Ig-like domain (Group 2)./Subtilase family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GX24_9FIRM
Bacterial Ig-like domain (Group 2)./Subtilase family {ECO:0000313|EMBL:CDB30008.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
serine protease subtilisin family protein
L3_102_000M1_scaffold_2758_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2364..3362)
DNA (999bp) protein (333aa)
Beta-lactamase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H0E2_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CDB31208.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_2758_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(3746..4897)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30992.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
aldo/keto reductase
L3_102_000M1_scaffold_2758_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(4912..5799)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HBQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30991.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_2758_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

6069..7019
DNA (951bp) protein (317aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Pseudouridine synthase RluA family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZW6_9FIRM
putative pseudouridine synthase
L3_102_000M1_scaffold_2758_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

7168..8289
DNA (1122bp) protein (374aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EPQ5_9FIRM
L3_102_000M1_scaffold_2758_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

8276..9133
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HBT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30996.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_102_000M1_scaffold_2758_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

9130..9951
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H2K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30995.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
binding-protein-dependent transport system inner membrane protein
L3_102_000M1_scaffold_2758_9
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

9971..11089
DNA (1119bp) protein (373aa)
ABC transporter solute-binding protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAQ0_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDB30994.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Spermidine/putrescine-binding periplasmic protein
L3_102_000M1_scaffold_2758_10
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11155..11610
DNA (456bp) protein (152aa)
Predicted integral membrane protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J830_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBK80501.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_102_000M1_scaffold_2758_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

11968..12714
DNA (747bp) protein (249aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QVC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32755.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_102_000M1_scaffold_2758_12
unknown

Not on your lists

comp(12755..12970)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_102_000M1_scaffold_2758_13
unknown

Not on your lists

comp(12958..13389)
DNA (432bp) protein (144aa)

This feature has no annotations

L3_102_000M1_scaffold_2758_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(13359..13775)
DNA (417bp) protein (139aa)
RelA/SpoT family protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H801_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:CDB29661.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_102_000M1_scaffold_2758_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(13776..14552)
DNA (777bp) protein (259aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYT1_9FIRM
Displaying 15 items

View Taxonomy