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L3_102_000M1_scaffold_1638

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1638_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(1..5670)
DNA (5670bp) protein (1890aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GW99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29763.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
glycosyl hydrolase
L3_102_000M1_scaffold_1638_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(5786..6982)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HVY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29962.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_1638_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7050..12068)
DNA (5019bp) protein (1673aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003669BA2
Glycosyl hydrolase, family 85 {ECO:0000313|EMBL:EDT24883.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
endo-beta-N-acetylglucosaminidase
L3_102_000M1_scaffold_1638_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(12609..13544)
DNA (936bp) protein (312aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase class I n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H748_9FIRM
Mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CDB29371.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1638_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(13541..14434)
DNA (894bp) protein (298aa)
Fructokinase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GY09_9FIRM
Fructokinase {ECO:0000313|EMBL:CDB29370.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ROK family protein
L3_102_000M1_scaffold_1638_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

14724..16454
DNA (1731bp) protein (577aa)
Histidine kinase internal region n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H638_9FIRM
Histidine kinase internal region {ECO:0000313|EMBL:CDB29369.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
histidine kinase internal region
L3_102_000M1_scaffold_1638_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

16456..17331
DNA (876bp) protein (292aa)
DNA-binding response regulator n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GV70_9FIRM
DNA-binding response regulator {ECO:0000313|EMBL:CDB29368.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
AraC family transcriptional regulator
L3_102_000M1_scaffold_1638_8
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17292..18749
DNA (1458bp) protein (486aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus vortex V453 RepID=E5Z2H6_9BACL
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:ETT32042.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
family 1 extracellular solute-binding protein
L3_102_000M1_scaffold_1638_9
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

18768..19403
DNA (636bp) protein (212aa)
Predicted integral membrane protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H742_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CDB29366.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_1638_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

19449..21167
DNA (1719bp) protein (573aa)
pgcA; Phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GY04_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:CDB29365.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1638_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(21782..22681)
DNA (900bp) protein (300aa)
Transcription regulator n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAH1_9FIRM
Transcription regulator {ECO:0000313|EMBL:CDB30929.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
LysR family transcriptional regulator
L3_102_000M1_scaffold_1638_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

22805..23341
DNA (537bp) protein (179aa)
Flavodoxin n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H2C0_9FIRM
Flavodoxin {ECO:0000313|EMBL:CDB30930.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Flavodoxin
L3_102_000M1_scaffold_1638_13
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

23432..24163
DNA (732bp) protein (244aa)
Cupin domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HYQ0_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDB30932.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
gamma-carboxymuconolactone decarboxylase
L3_102_000M1_scaffold_1638_14
unknown

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comp(24445..25185)
DNA (741bp) protein (247aa)

This feature has no annotations

L3_102_000M1_scaffold_1638_15
unknown

Not on your lists

comp(25887..26549)
DNA (663bp) protein (221aa)

This feature has no annotations

L3_102_000M1_scaffold_1638_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(27491..29755)
DNA (2265bp) protein (755aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23190.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_102_000M1_scaffold_1638_17
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(29888..33115)
DNA (3228bp) protein (1076aa)
Alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HCG3_9FIRM
Alpha-mannosidase {ECO:0000313|EMBL:CDB31236.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1638_18
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(33172..34158)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HZI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31237.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
glycosidase
L3_102_000M1_scaffold_1638_19
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(34504..35454)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H0H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31238.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Displaying 19 items

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