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L3_102_000M1_scaffold_1923

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1923_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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3..224
DNA (222bp) protein (74aa)
Putative manganese efflux pump MntP n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9H1_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Predicted membrane protein
L3_102_000M1_scaffold_1923_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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497..1426
DNA (930bp) protein (310aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYL2_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDB30518.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1923_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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1429..2382
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HXN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30517.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
L3_102_000M1_scaffold_1923_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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2379..4544
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H2F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30960.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
transglutaminase domain-containing protein
L3_102_000M1_scaffold_1923_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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4568..5257
DNA (690bp) protein (230aa)
Two-component response regulator n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAK7_9FIRM
Two-component response regulator {ECO:0000313|EMBL:CDB30959.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
vanR; two-component response regulator
L3_102_000M1_scaffold_1923_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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5250..6362
DNA (1113bp) protein (371aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QSZ5_9FIRM
hypothetical protein
L3_102_000M1_scaffold_1923_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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6509..7333
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HBL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30956.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_102_000M1_scaffold_1923_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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7340..8389
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H2F4_9FIRM
L3_102_000M1_scaffold_1923_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8386..8850
DNA (465bp) protein (155aa)
putative serine acetyltransferase (EC:2.3.1.30)
Putative serine acetyltransferase {ECO:0000313|EMBL:BAK98147.1}; EC=2.3.1.30 {ECO:0000313|EMBL:BAK98147.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative serine acetyltransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KVB8_OSCVS
L3_102_000M1_scaffold_1923_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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8857..10032
DNA (1176bp) protein (392aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAJ8_9FIRM
L3_102_000M1_scaffold_1923_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(10114..10377)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAJ1_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
rpsT; 30S ribosomal protein S20
L3_102_000M1_scaffold_1923_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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10553..11386
DNA (834bp) protein (278aa)
gpr; putative germination protease (EC:3.4.24.78)
Germination protease n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HXR2_9FIRM
Germination protease {ECO:0000313|EMBL:CDB30547.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1923_13
unknown

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11401..11550
DNA (150bp) protein (50aa)

This feature has no annotations

L3_102_000M1_scaffold_1923_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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11937..13595
DNA (1659bp) protein (553aa)
serine protease (EC:3.4.21.-)
Trypsin n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXG9_9FIRM
Trypsin {ECO:0000313|EMBL:CDB29150.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1923_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(13897..14994)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H3G3_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
engD; GTP-dependent nucleic acid-binding protein EngD
L3_102_000M1_scaffold_1923_16
unknown

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15442..15570
DNA (129bp) protein (43aa)
hypothetical protein
L3_102_000M1_scaffold_1923_17
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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15600..15947
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FLX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05878.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
Adenine specific DNA methylase Mod
L3_102_000M1_scaffold_1923_18
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16015..17502
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P0S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS21810.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_102_000M1_scaffold_1923_19
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(17599..18819)
DNA (1221bp) protein (407aa)
L-serine dehydratase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HTG1_9FIRM
L-serine dehydratase {ECO:0000313|EMBL:CDB29187.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L-serine dehydratase
L3_102_000M1_scaffold_1923_20
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(18897..19052)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29186.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_102_000M1_scaffold_1923_21
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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19242..20141
DNA (900bp) protein (300aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
tyrS; prolyl-tRNA synthetase (EC:6.1.1.1)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXJ7_9FIRM
Displaying 21 items

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