ggKbase home page

L3_102_000M1_scaffold_1184

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1184_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71..1300)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95492.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_102_000M1_scaffold_1184_2
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..2667)
DNA (1302bp) protein (434aa)
Oligopeptide transport system ATP-binding protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JSI5_9FIRM
Oligopeptide transport system ATP-binding protein {ECO:0000313|EMBL:EOS37150.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
oppF1; oligopeptide ABC transporter ATP-binding protein OppF1
L3_102_000M1_scaffold_1184_3
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2680..4428)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18656.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
oppD1; oligopeptide ABC transporter ATP-binding protein OppD1
L3_102_000M1_scaffold_1184_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4441..5430)
DNA (990bp) protein (330aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C0FPN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31523.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
oppC1; peptide ABC transporter permease
L3_102_000M1_scaffold_1184_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5437..7014)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5I3H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31522.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
oppB1; peptide ABC transporter permease
L3_102_000M1_scaffold_1184_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7443..9647)
DNA (2205bp) protein (735aa)
Oligopeptide-binding protein AmiA domain protein n=2 Tax=Roseburia RepID=C0FPN1_9FIRM
Oligopeptide-binding protein AmiA domain protein {ECO:0000313|EMBL:EEG95486.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
oppA1; oligopeptide ABC transporter substrate-binding protein OppA1
L3_102_000M1_scaffold_1184_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(9996..11285)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92796.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_102_000M1_scaffold_1184_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

11608..12456
DNA (849bp) protein (283aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW34_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CCX92797.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_102_000M1_scaffold_1184_9
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

12586..13347
DNA (762bp) protein (254aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EN09_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCX92799.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_102_000M1_scaffold_1184_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

13334..14056
DNA (723bp) protein (241aa)
Polar amino acid transport system ATP-binding protein (EC:3.6.3.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92800.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_102_000M1_scaffold_1184_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

14173..14544
DNA (372bp) protein (124aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW38_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCX92802.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
GntR family transcriptional regulator
L3_102_000M1_scaffold_1184_12
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

14547..15389
DNA (843bp) protein (281aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EK18_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX92803.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ABC-type multidrug transport system, ATPase component
L3_102_000M1_scaffold_1184_13
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

15391..16005
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EN13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92804.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_102_000M1_scaffold_1184_14
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(16062..17078)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXM3_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCX92806.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
UDP-glucose 4-epimerase
L3_102_000M1_scaffold_1184_15
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(17190..18314)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92807.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Phosphotransferase enzyme family.
L3_102_000M1_scaffold_1184_16
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(18342..19220)
DNA (879bp) protein (293aa)
Transcriptional regulator LysR family n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EN17_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCX92809.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
LysR substrate binding domain protein
L3_102_000M1_scaffold_1184_17
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

19425..20876
DNA (1452bp) protein (484aa)
Sodium/proline symporter n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXM8_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:CCX92811.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
sodium/proline symporter
L3_102_000M1_scaffold_1184_18
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

21025..22170
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92812.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_102_000M1_scaffold_1184_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22638..24089)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KA00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40666.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
arylsulfatase
L3_102_000M1_scaffold_1184_20
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25191..28334
DNA (3144bp) protein (1048aa)
SNF2-related protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U790_ETHHY
SNF2-related protein
SNF2-related protein {ECO:0000313|EMBL:CDZ24491.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_102_000M1_scaffold_1184_21
unknown

Not on your lists

28479..29087
DNA (609bp) protein (203aa)

This feature has no annotations

L3_102_000M1_scaffold_1184_22
unknown

Not on your lists

29180..29242
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 22 items

View Taxonomy