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L3_102_000M1_scaffold_5366

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_5366_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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543..1439
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62392.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
membrane protein
L3_102_000M1_scaffold_5366_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1576..2103
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N7D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78876.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L3_102_000M1_scaffold_5366_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2560..3249
DNA (690bp) protein (230aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE71_9CLOT
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:CCX51147.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_5366_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3311..3742
DNA (432bp) protein (144aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6K2_9CLOT
ribonuclease III family protein
L3_102_000M1_scaffold_5366_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3744..4799
DNA (1056bp) protein (352aa)
TrmH family tRNA/rRNA methyltransferase YacO n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEK6_9CLOT
TrmH family tRNA/rRNA methyltransferase YacO {ECO:0000313|EMBL:CCX49851.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rRNA methylase, putative, group 3
L3_102_000M1_scaffold_5366_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4806..5402
DNA (597bp) protein (199aa)
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-30 factor (Sigma(H)) n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2N1_9CLOT
RNA polymerase sigma-30 factor (Sigma(H)) {ECO:0000313|EMBL:CCX49850.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_5366_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5581..6225
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030B9EEF
Restriction endonuclease BglII {ECO:0000313|EMBL:ERK64761.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Restriction endonuclease BglII
L3_102_000M1_scaffold_5366_8
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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6227..6874
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0003030FD3
MT-A70 family protein
MT-A70 family protein {ECO:0000313|EMBL:ADU27209.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_102_000M1_scaffold_5366_9
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6928..7224)
DNA (297bp) protein (99aa)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJI7_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
translation elongation factor 1A (EF-1A/EF-Tu)
Displaying 9 items

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