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L3_102_000M1_scaffold_804

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_804_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(139..7794)
DNA (7656bp) protein (2552aa)
Glycosyltransferase 36 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEE1_ANADE
glycosyltransferase 36
Glycosyltransferase 36 {ECO:0000313|EMBL:ABC82952.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
L3_102_000M1_scaffold_804_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7907..8113)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B787_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50079.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
septum formation initiator
L3_102_000M1_scaffold_804_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8186..8638)
DNA (453bp) protein (151aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3E5_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_102_000M1_scaffold_804_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8731..9435)
DNA (705bp) protein (235aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF90_9CLOT
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CCX50081.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alanine racemase
L3_102_000M1_scaffold_804_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9475..10632)
DNA (1158bp) protein (386aa)
Uncharacterized conserved protein UCP02828 putative membrane fusion protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB64_9CLOT
Uncharacterized conserved protein UCP02828 putative membrane fusion protein {ECO:0000313|EMBL:CCX50082.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_804_6
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10655..11959)
DNA (1305bp) protein (435aa)
Peptidase M16 domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AKN8_9CLOT
Peptidase M16 domain protein {ECO:0000313|EMBL:CDA51570.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
peptidase M16-like protein
L3_102_000M1_scaffold_804_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11926..12612)
DNA (687bp) protein (229aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B792_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CCX50084.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
polysaccharide deacetylase
L3_102_000M1_scaffold_804_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12728..14824)
DNA (2097bp) protein (699aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI86_9CLOT
polyribonucleotide nucleotidyltransferase
L3_102_000M1_scaffold_804_9
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14944..16086)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G6F1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGX60842.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
L3_102_000M1_scaffold_804_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16287..16541)
DNA (255bp) protein (85aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5W4_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S15
L3_102_000M1_scaffold_804_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16671..17411)
DNA (741bp) protein (247aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCU4_9CLOT
riboflavin biosynthesis protein RibF
L3_102_000M1_scaffold_804_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17381..18280)
DNA (900bp) protein (300aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGT4_9CLOT
L3_102_000M1_scaffold_804_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18265..19236)
DNA (972bp) protein (324aa)
Phosphoesterase RecJ domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B528_9CLOT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CCX50670.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
phosphoesterase RecJ domain-containing protein
L3_102_000M1_scaffold_804_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19294..19644)
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8V0_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ribosome-binding factor A
L3_102_000M1_scaffold_804_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19663..22239)
DNA (2577bp) protein (859aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5W0_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
translation initiation factor IF-2
L3_102_000M1_scaffold_804_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22260..22568)
DNA (309bp) protein (103aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCT9_9CLOT
Ribosomal protein L7Ae/L30e/S12e/Gadd45 {ECO:0000313|EMBL:CCX50667.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_102_000M1_scaffold_804_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22558..22830)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79555.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_102_000M1_scaffold_804_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22847..23935)
DNA (1089bp) protein (363aa)
Transcription termination factor NusA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B523_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
transcription termination factor NusA
L3_102_000M1_scaffold_804_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23938..24465)
DNA (528bp) protein (176aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8U7_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_102_000M1_scaffold_804_20
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24630..28844)
DNA (4215bp) protein (1405aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
DNA polymerase III polC-type n=1 Tax=Clostridium sp. CAG:138 RepID=R6AN12_9CLOT
DNA polymerase III subunit alpha
L3_102_000M1_scaffold_804_21
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28848..29906)
DNA (1059bp) protein (353aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ATB7_9CLOT
L3_102_000M1_scaffold_804_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29940..30959)
DNA (1020bp) protein (340aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Putative membrane-associated protease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8I0_9CLOT
putative membrane-associated protease
L3_102_000M1_scaffold_804_23
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30960..32102)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium sp. CAG:138 RepID=R6BHJ1_9CLOT
L3_102_000M1_scaffold_804_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32119..32967)
DNA (849bp) protein (283aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Phosphatidate cytidylyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGJ1_9CLOT
CDP-diglyceride synthetase
L3_102_000M1_scaffold_804_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32992..33711)
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4S2_9CLOT
L3_102_000M1_scaffold_804_26
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33758..33958)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AVI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA52854.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_102_000M1_scaffold_804_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33955..34506)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5I6_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ribosome recycling factor
L3_102_000M1_scaffold_804_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34621..35325)
DNA (705bp) protein (235aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCH1_9CLOT
L3_102_000M1_scaffold_804_29
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35432..36322)
DNA (891bp) protein (297aa)
Elongation factor Ts n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AKR1_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
translation elongation factor Ts
L3_102_000M1_scaffold_804_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36359..37093)
DNA (735bp) protein (245aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4R7_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S2
Displaying 30 items

View Taxonomy