ggKbase home page

L3_102_000M1_scaffold_2340_2

Organism: dasL3_102_000M1_metabat_metabat_58_fa_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1349..2374)

Top 3 Functional Annotations

Value Algorithm Source
Possible RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5Y1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 371.0
  • Bit_score: 230
  • Evalue 1.50e-57
Possible RNA polymerase sigma factor {ECO:0000313|EMBL:CCX49589.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 371.0
  • Bit_score: 230
  • Evalue 2.10e-57
Sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 22.7
  • Coverage: 251.0
  • Bit_score: 68
  • Evalue 3.70e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1026
ATGACAGGCAAGCTTACTGCAATAGGTATTATCTCCATGGCGGTGCTGTTGACCGGCGCCGGCTGCGTGGAGGCCGCCACCACCGCCAATACCGTCTTCAAAGAGGAGACGGAGGGGGTGCTTGTTGCAGCGGAGCAAAGTTCCCGGGAGGATGGCAAATCTCTCTTTGACCTGCCAACTCCACGGCCTACCATAGCCCCGGTCAAAATCAAAATAAGCCAGTCCCCGCTGCCGACGCCCCCTGCGGAAACCCCATATACGGTGGACGGGAACGTCTCCGAGGACGCCGCAAGCCCTGCCGCGTCTCCCGTGCCTGCGAACACCCCGGATTCTTCGGACAAGCCTGAGTATACCGTGGAGGATATGGATGATACCGCAGGCTATGTCTACGCAAAGAGCATAAACCTGCGCTCCGGCCCGGGAGAGGATTACAAGATCGTCCGGGAATACCAGCAGAACCGCAAGGTGACGATCACGGGCAAGTCGGGCGACTGGTACAGGGTAAGGGTCGGAAAGAGGAAGGGCTTTATGCTTATGGAATACATAAAGCTGGGGGACCCGCCGGAAAGCACCCCCAAGCCCACAGAAAAGCCCAAGGCCACAAGCAAGCCCAAGGCCACGCCCAAGGCGGAGGAGATCGAGGTGATAACACCCGTTGAAACGCCGTCGGGCGGGCAGGGCAGCATGAACGGCGGCGGGGGCTATACCGGCGAGGAGCTGTACCTTATCGCGCAGGTGGTGCGTAAGGAGGGGGACAGCGAAAGCTATACCGCCGTTGCGAACGTAATATACAACCGCCTGCACAGCAGCAGGTTTCCAAGTACTGTAAACGGCGTGATATACCAGAAGGGGCAGTTTTCCACCTCCAGCCTAAAAGCGCCAAATGCCGCGGCCGAGGCTGCGGTGACATCGGTATTTATCAACGGCAATACCGTACTTCCCTCCGATGTGCTGTTCTTCAGAAACAGCGGCAGCTGGGATCATGAGCTGTATGCCAAGATAGGCGGCAACTATTTTTACTATTAA
PROTEIN sequence
Length: 342
MTGKLTAIGIISMAVLLTGAGCVEAATTANTVFKEETEGVLVAAEQSSREDGKSLFDLPTPRPTIAPVKIKISQSPLPTPPAETPYTVDGNVSEDAASPAASPVPANTPDSSDKPEYTVEDMDDTAGYVYAKSINLRSGPGEDYKIVREYQQNRKVTITGKSGDWYRVRVGKRKGFMLMEYIKLGDPPESTPKPTEKPKATSKPKATPKAEEIEVITPVETPSGGQGSMNGGGGYTGEELYLIAQVVRKEGDSESYTAVANVIYNRLHSSRFPSTVNGVIYQKGQFSTSSLKAPNAAAEAAVTSVFINGNTVLPSDVLFFRNSGSWDHELYAKIGGNYFYY*